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8
votes
7
replies
1.0k
views
Why does Ensembl VEP provide HGVSg for some variants and not others?
vcf
VEP
9 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
2.0k
views
Comment:
Comment: VEP tab/vcf - Different output
9 months ago by
Jeremy Leipzig
22k
0
votes
2
replies
2.0k
views
Comment:
Comment: VEP tab/vcf - Different output
9 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
832
views
Comment:
Comment: How GATK pipeline called a homozygeous alternate allele (1/1) although one copy
10 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
1.2k
views
Answer:
Answer: Understanding Used Assembly: Why aren't authors specific about patch version?
8 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
1.4k
views
Comment:
Comment: Why are some WES VCFs larger than others?
10 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
544
views
Answer:
Answer: Variant calling in WES vs WGS
10 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
669
views
Comment:
Comment: Participate in a NCBI/NIAID Virtual Codeathon: VCF Files for Population Genomic
10 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
1.2k
views
Comment:
Comment: How to efficiently/quickly merge ~500k vcfs?
10 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
359
views
How do I annotate with the Clingen Canonical Allele Identifiers?
allele
vcf
clingen
10 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
654
views
Comment:
Comment: My VCF file structure is strange and less compatible to data processing programs
10 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
656
views
Answer:
Answer: GRange: Average Metadata Value from 3 Replicates
10 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
436
views
Comment:
Comment: How do I figure out what splicing variant is expressed in certain tissue?
10 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
1.2k
views
Answer:
Answer: How to efficiently/quickly merge ~500k vcfs?
10 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
684
views
Answer:
Answer: Why is my code only printing the first position?
11 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
684
views
Comment:
Comment: Why is my code only printing the first position?
11 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
684
views
Comment:
Comment: Why is my code only printing the first position?
11 months ago by
Jeremy Leipzig
22k
3
votes
0
replies
4.1k
views
Answer:
Answer: I want to correct the erroneous barcode file, and the Python code that I've writ
11 months ago by
Jeremy Leipzig
22k
1
vote
0
replies
844
views
Answer:
Answer: Number of allelic depths is larger than number of inferred alleles in VCF file
11 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
844
views
Comment:
Comment: Number of allelic depths is larger than number of inferred alleles in VCF file
11 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
374
views
Which UCSC annotation tracks would be most useful in modeling the effect of eQTLs on expression data?
eQTL
11 months ago by
Jeremy Leipzig
22k
2
votes
0
replies
961
views
Answer:
Answer: Sequencing and assembly of mitochondrial DNA
11 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
794
views
Answer:
Answer: What does Z-score and beta value mean in GWAS results?
11 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
943
views
Comment:
Comment: why CombineGCVFs in gatk not showing all the samples name?
11 months ago by
Jeremy Leipzig
22k
2
votes
0
replies
820
views
Answer:
Answer: SKAT TEST
11 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
1.3k
views
Comment:
Comment: Convert VCF files to input file format requiered by XP-CLR1.0 software
11 months ago by
Jeremy Leipzig
22k
2
votes
2
replies
1.9k
views
Answer:
Answer: What's the general view on point & click bioinformatics for routine analyses?
11 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
426
views
Answer:
Answer: Dataset of rare regulatory intronic variants
12 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
568
views
Comment:
Comment: Sample size for population genetics
12 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
568
views
Answer:
Answer: Sample size for population genetics
12 months ago by
Jeremy Leipzig
22k
1
vote
0
replies
1.1k
views
Comment:
Comment: samtools idxstats not removing ChrM
12 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
913
views
Answer:
Answer: GIAB Truth Set
12 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
644
views
Answer:
Answer: ChrX allele frequency in males and females
12 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
446
views
Are there any papers that have both anatomical imaging data and variants?
vcf
imaging
updated 12 months ago by
LChart
3.9k • written 12 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
2.4k
views
Comment:
Comment: Rust bioinformatics projects ideas
12 months ago by
Jeremy Leipzig
22k
3
votes
1
reply
2.4k
views
Answer:
Answer: Rust bioinformatics projects ideas
12 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
1.2k
views
Answer:
Answer: What is the general structure of a WDL that implements "embarrassing paralleliza
13 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
1.1k
views
Comment:
Comment: BWA-mem not working with Snakemake + singularity
13 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
2.0k
views
Comment:
Comment: How should reference genome fasta files be distributed by UCSC?
13 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
2.0k
views
Answer:
Answer: How should reference genome fasta files be distributed by UCSC?
13 months ago by
Jeremy Leipzig
22k
2
votes
0
replies
935
views
Answer:
Answer: Implementing FAIR data principles to a bioinformatics lab
13 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
1.1k
views
Comment:
Comment: BWA-mem not working with Snakemake + singularity
13 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
1.1k
views
Comment:
Comment: BWA-mem not working with Snakemake + singularity
13 months ago by
Jeremy Leipzig
22k
3
votes
0
replies
874
views
Answer:
Answer: What type of database does gnomAD use?
13 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
4.7k
views
Comment:
Comment: How to Calulate Allele Frequency from a VCF File?
14 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
4.7k
views
Comment:
Comment: How to Calulate Allele Frequency from a VCF File?
14 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
4.7k
views
Comment:
Comment: How to Calulate Allele Frequency from a VCF File?
14 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
4.7k
views
Comment:
Comment: How to Calulate Allele Frequency from a VCF File?
14 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
4.7k
views
Comment:
Comment: How to Calulate Allele Frequency from a VCF File?
14 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
790
views
Comment:
Comment: gwas summary statistics
14 months ago by
Jeremy Leipzig
22k
1,321 results • Page
3 of 27
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