Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
questions
5
votes
5
replies
1.2k
views
RNAseq: Filtering before or after transformation?
DESeq2
transformation
RNAseq
filtering
updated 21 months ago by
ATpoint
81k • written 21 months ago by
plicht
▴ 20
0
votes
2
replies
517
views
TopHat2 to align RNA with or without annotation file
RNAseq
GFF
GTF
TopHat2
22 months ago by
plicht
▴ 20
2
votes
6
replies
1.3k
views
How to extract reads that map exclusively to a single site with 1 or zero mismatches from BAM files
RNAseq
Samtools
updated 22 months ago by
Istvan Albert
100k • written 22 months ago by
plicht
▴ 20
0
votes
0
replies
371
views
HTSeq-count: proper pairs in bam file
BWA
-count
RNAseq
HTseq
22 months ago by
plicht
▴ 20
3
votes
2
replies
680
views
How to filter for evalue threshold in blastx output
bash
blastx
updated 2.0 years ago by
Buffo
★ 2.3k • written 2.0 years ago by
plicht
▴ 20
0
votes
0
replies
424
views
Search group specific genes in presence/absence matrix of pangenome
R
statistics
binary
microbiome
pangenome
2.2 years ago by
plicht
▴ 20
4
votes
3
replies
3.0k
views
Downsampling fastq reads
next-gen
metagenomics
updated 3.0 years ago by
onestop_data
▴ 330 • written 3.1 years ago by
plicht
▴ 20
0
votes
1
reply
2.3k
views
post-hoc (Tukey) on adonis (permanova)
R
statistics
3.1 years ago by
plicht
▴ 20
1
vote
7
replies
2.2k
views
Extracting group-specific combinations from distance matrix
R
3.1 years ago by
plicht
▴ 20
1
vote
1
reply
1.1k
views
alpha diversity metrics for relative frequency data
R
metagenomics
statistics
3.2 years ago by
plicht
▴ 20
0
votes
0
replies
909
views
Which diversity index for relative abundance data?
Statistics
R
metagenomics
OTU
phyloseq
3.2 years ago by
plicht
▴ 20
0
votes
0
replies
570
views
Can I apply log transformation on proportions in compositional microbiomic data
microbiome
R
selbal
compositional data
3.2 years ago by
plicht
▴ 20
0
votes
0
replies
781
views
How to normalize between samples in WGS metagenomics
Metagenomics
shotgun metagenomics
Normalization
3.5 years ago by
plicht
▴ 20
2
votes
11
replies
3.9k
views
Importing MetaPhlAn3 profile table into phyloseq to use decontam
software error
R
3.6 years ago by
plicht
▴ 20
1
vote
1
reply
1.3k
views
Trimmomatic on NEBNext Ultra II FS DNA
Trimmomatic
Adapters
sequencing
next-gen
3.6 years ago by
plicht
▴ 20
15 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6