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4
votes
6
replies
3.8k
views
IDT vs primer 3 - PCR dimerisation
PCR
primer3
IDT
primer
updated 13 months ago by
Emrah
• 0 • written 4.2 years ago by
timothy.kirkwood
▴ 140
2
votes
4
replies
979
views
remote tblastn database name(s)
blast
database
tblastn
updated 17 months ago by
Mensur Dlakic
★ 28k • written 17 months ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
979
views
Comment:
Comment: remote tblastn database name(s)
17 months ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
645
views
Comment:
Comment: HSP of length 0
19 months ago by
timothy.kirkwood
▴ 140
0
votes
3
replies
645
views
HSP of length 0
alignment
blastp
updated 19 months ago by
GenoMax
146k • written 19 months ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
841
views
Comment:
Comment: All vs all blast - unexpected results
20 months ago by
timothy.kirkwood
▴ 140
2
votes
2
replies
841
views
All vs all blast - unexpected results
alignment
seg
blastp
20 months ago by
timothy.kirkwood
▴ 140
1
vote
0
replies
1.6k
views
Comment:
Comment: NCBI - incomplete protein annotations
21 months ago by
timothy.kirkwood
▴ 140
5
votes
6
replies
1.6k
views
NCBI - incomplete protein annotations
ncbi
blast
refseq
20 months ago by
timothy.kirkwood
▴ 140
1
vote
0
replies
1.6k
views
Answer:
Answer: NCBI - incomplete protein annotations
20 months ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
1.6k
views
Comment:
Comment: NCBI - incomplete protein annotations
21 months ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
1.6k
views
Comment:
Comment: NCBI - incomplete protein annotations
21 months ago by
timothy.kirkwood
▴ 140
1
vote
0
replies
9.7k
views
Comment:
Comment: BLAST Database error: Error pre-fetching sequence data
2.2 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
1.1k
views
Answer:
Answer: How can I find gene cluster containing certain gene?
2.2 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
496
views
homology and protein function inference
homology
evolution
function
2.2 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
2.3k
views
Comment:
Comment: Identifying BGC's coexpression (antismash)
2.3 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
712
views
Comment:
Comment: pfam functional redundancy
2.4 years ago by
timothy.kirkwood
▴ 140
2
votes
2
replies
712
views
pfam functional redundancy
redundancy
protein
pfam
domain
function
2.4 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
458
views
Nucleotide codes - gap vs low quality basecalls
assembly
ncbi
gap
basecall
nucleotide
2.4 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
2.1k
views
Answer:
Answer: antiSMASH output
2.5 years ago by
timothy.kirkwood
▴ 140
2
votes
3
replies
1.1k
views
BLAST+ v2.10.1 file accessibility
python
blastp
3.0 years ago by
timothy.kirkwood
▴ 140
1
vote
0
replies
1.1k
views
Answer:
Answer: BLAST+ v2.10.1 file accessibility
3.0 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
1.1k
views
Comment:
Comment: BLAST+ v2.10.1 file accessibility
3.0 years ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
1.3k
views
Comment:
Comment: Inferring homology from BLAST scores/statistics
3.0 years ago by
timothy.kirkwood
▴ 140
4
votes
3
replies
1.3k
views
Inferring homology from BLAST scores/statistics
statistics
blast
updated 3.0 years ago by
Mensur Dlakic
★ 28k • written 3.0 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
7.2k
views
Comment:
Comment: remote command line BLAST job ends in CPU error and gives MBEDTLS version mismat
3.1 years ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
7.2k
views
Comment:
Comment: remote command line BLAST job ends in CPU error and gives MBEDTLS version mismat
3.1 years ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
7.2k
views
Comment:
Comment: remote command line BLAST job ends in CPU error and gives MBEDTLS version mismat
3.1 years ago by
timothy.kirkwood
▴ 140
1
vote
0
replies
5.1k
views
Comment:
Comment: How to run local BLAST (Standalone NCBI BLAST+) with Python?
3.1 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
1.4k
views
Comment:
Comment: Remote blast query limit
3.1 years ago by
timothy.kirkwood
▴ 140
1
vote
2
replies
1.4k
views
Remote blast query limit
remote
blast
3.1 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
2.6k
views
Comment:
Comment: BLAST masking
3.1 years ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
2.6k
views
Comment:
Comment: BLAST masking
3.1 years ago by
timothy.kirkwood
▴ 140
0
votes
4
replies
2.6k
views
BLAST masking
masking
database
blastp
3.1 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
583
views
BLASTP - parameters for soft filtering and smith-waterman alignment
seg
soft-filtering
blastp
updated 3.3 years ago by
Ram
44k • written 3.3 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
576
views
Visualising SeqRecords with compound locations
genbank
snapgene
benchling
biopython
3.3 years ago by
timothy.kirkwood
▴ 140
2
votes
1
reply
990
views
Biopython SeqRecord alphabet compatibility
alphabet
biopython
3.3 years ago by
timothy.kirkwood
▴ 140
2
votes
0
replies
990
views
Answer:
Answer: Biopython SeqRecord alphabet compatibility
3.3 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
2.7k
views
Comment:
Comment: What are the makeblastdb database files doing?
3.3 years ago by
timothy.kirkwood
▴ 140
3
votes
2
replies
2.7k
views
What are the makeblastdb database files doing?
blastp
database
3.3 years ago by
timothy.kirkwood
▴ 140
1
vote
1
reply
1.2k
views
Answer:
Answer: Co-occurrence of proteins of two families
3.3 years ago by
timothy.kirkwood
▴ 140
1
vote
0
replies
2.2k
views
Comment:
Comment: Orthologs vs PFAM
3.3 years ago by
timothy.kirkwood
▴ 140
0
votes
1
reply
2.2k
views
Comment:
Comment: Orthologs vs PFAM
3.3 years ago by
timothy.kirkwood
▴ 140
0
votes
2
replies
2.2k
views
Comment:
Comment: Orthologs vs PFAM
3.3 years ago by
timothy.kirkwood
▴ 140
17
votes
14
replies
2.2k
views
6 follow
Orthologs vs PFAM
ortholog
pfam
updated 3.2 years ago by
lieven.sterck
15k • written 3.3 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
848
views
Comment:
Comment: Building a phylogenetic tree from different ortholog groups
3.3 years ago by
timothy.kirkwood
▴ 140
0
votes
2
replies
848
views
Building a phylogenetic tree from different ortholog groups
COGs
phylogenetics
msa
3.3 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
923
views
Comment:
Comment: BLASTP local vs website
3.4 years ago by
timothy.kirkwood
▴ 140
1
vote
2
replies
923
views
BLASTP local vs website
blastp
3.4 years ago by
timothy.kirkwood
▴ 140
0
votes
0
replies
1.6k
views
Comment:
Comment: Nucleotide BLAST
3.4 years ago by
timothy.kirkwood
▴ 140
77 results • Page
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