User: karta2194512

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How to map the RNA-seq reads to the genes with various intron length on genome using STAR?
... I tried to align an RNA-seq short-read data to a plant genome with STAR (version 2.7.3a), and found some of the mapped reads would be separated into two fragments with abnormally long intron. Then I searched for the setting of maximum intron length (`alignIntronMax`), and got a number 10,000 used fo ...
rna-seq star alignment genome written 5 months ago by karta21945120 • updated 12 weeks ago by Biostar ♦♦ 20

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