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1
vote
0
replies
2.4k
views
Comment:
C: Galaxy installation on AWS and charges
9.0 years ago by
Devon Ryan
105k
0
votes
1
reply
2.7k
views
Comment:
C: Exceptional Symmetry of DNA Sequences
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
2.0k
views
Comment:
C: Co-immunoprecipitation in Chip-Seq
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
8.0k
views
Comment:
C: SAM/BAM file filtering
9.0 years ago by
Devon Ryan
105k
2
votes
1
reply
1.8k
views
Comment:
C: Low Sample For Coexpression
9.0 years ago by
Devon Ryan
105k
1
vote
1
reply
2.0k
views
Answer:
A: Co-immunoprecipitation in Chip-Seq
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
4.3k
views
Comment:
C: How to plot "normalized read density" vs "insert size"
9.0 years ago by
Devon Ryan
105k
5
votes
1
reply
11k
views
Answer:
A: Extract uniquely mapped reads from bam file
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
11k
views
Comment:
C: Extract uniquely mapped reads from bam file
9.0 years ago by
Devon Ryan
105k
1
vote
1
reply
11k
views
Comment:
C: Extract uniquely mapped reads from bam file
9.0 years ago by
Devon Ryan
105k
0
votes
2
replies
11k
views
Comment:
C: Extract uniquely mapped reads from bam file
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
4.6k
views
Comment:
C: Resources to learn htslib and C/C++
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
1.4k
views
Answer:
A: interpretation if fastqc
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
5.9k
views
Answer:
A: Why chip-seq is strand specific?
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
4.3k
views
Answer:
A: edgeR RNA-seq analysis (glm, plots, and heatmaps)
9.0 years ago by
Devon Ryan
105k
2
votes
0
replies
3.4k
views
Comment:
C: Bcftools magic string
9.0 years ago by
Devon Ryan
105k
1
vote
1
reply
4.3k
views
Comment:
C: How to plot "normalized read density" vs "insert size"
9.0 years ago by
Devon Ryan
105k
2
votes
2
replies
3.4k
views
Comment:
C: Bcftools magic string
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
2.2k
views
Comment:
C: Allele with high population frequency also tagged as pathogenic
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
3.3k
views
Comment:
C: Splitting SAM/BAM alignments
9.0 years ago by
Devon Ryan
105k
2
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1
reply
3.3k
views
Comment:
C: Splitting SAM/BAM alignments
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
15k
views
Comment:
C: bedtools merge, ERROR: file has non positional records, which are only valid for
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
2.4k
views
Comment:
C: How should I define contrast with more than 2 levels in DESeq2 ?
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
3.8k
views
Comment:
C: Number of reads mapped to genome
9.0 years ago by
Devon Ryan
105k
0
votes
1
reply
3.8k
views
Comment:
C: Number of reads mapped to genome
9.0 years ago by
Devon Ryan
105k
4
votes
1
reply
3.8k
views
Answer:
A: Number of reads mapped to genome
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
3.5k
views
Comment:
C: How much Amazon hosting costs for a cloud Galaxy instance?
9.0 years ago by
Devon Ryan
105k
0
votes
1
reply
3.5k
views
Answer:
A: How much Amazon hosting costs for a cloud Galaxy instance?
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
2.6k
views
Comment:
C: 3'UTR of transcript
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
8.0k
views
Comment:
C: Samtools tview help
9.0 years ago by
Devon Ryan
105k
1
vote
1
reply
8.0k
views
Answer:
A: Samtools tview help
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
2.6k
views
Comment:
C: 3'UTR of transcript
9.0 years ago by
Devon Ryan
105k
4
votes
1
reply
3.3k
views
Answer:
A: Is it possible to call variants (SNPs) with bisulfite data?
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
3.4k
views
Comment:
C: Java code for indexing fasta file
9.0 years ago by
Devon Ryan
105k
0
votes
1
reply
3.4k
views
Comment:
C: Java code for indexing fasta file
9.0 years ago by
Devon Ryan
105k
0
votes
1
reply
3.4k
views
Comment:
C: Java code for indexing fasta file
9.0 years ago by
Devon Ryan
105k
1
vote
1
reply
5.7k
views
Comment:
C: How to tell if a gene is over- or under-expressed from the output of F test (dif
9.0 years ago by
Devon Ryan
105k
2
votes
1
reply
5.7k
views
Comment:
C: How to tell if a gene is over- or under-expressed from the output of F test (dif
9.0 years ago by
Devon Ryan
105k
0
votes
1
reply
8.1k
views
Comment:
C: No differentially expressed genes using DESeq2
9.0 years ago by
Devon Ryan
105k
0
votes
1
reply
3.0k
views
Comment:
C: Correcting odd GC bias in whole-exome CNV calling
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
5.7k
views
Comment:
C: How to tell if a gene is over- or under-expressed from the output of F test (dif
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
1.8k
views
Comment:
C: local de novo assembly and split-read alignment at known sites and output bams?
9.0 years ago by
Devon Ryan
105k
0
votes
1
reply
3.7k
views
Answer:
A: after I use sva package to remove batch effect,can I use DESeq2 to make DE analy
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
3.6k
views
Comment:
C: Do you use anti-sens reads for differential gene expression analysis with Strand
9.0 years ago by
Devon Ryan
105k
1
vote
2
replies
6.7k
views
Answer:
A: Calculating inner mate distance for paired reads
9.0 years ago by
Devon Ryan
105k
1
vote
1
reply
1.7k
views
Comment:
C: Are they're any sequencing file formats that are fragment-centric?
9.0 years ago by
Devon Ryan
105k
1
vote
1
reply
5.7k
views
Comment:
C: How to tell if a gene is over- or under-expressed from the output of F test (dif
9.0 years ago by
Devon Ryan
105k
3
votes
1
reply
2.2k
views
Comment:
C: Why less DE for non replicates
9.0 years ago by
Devon Ryan
105k
1
vote
0
replies
2.2k
views
Answer:
A: Why less DE for non replicates
9.0 years ago by
Devon Ryan
105k
0
votes
0
replies
18k
views
Comment:
C: Convert HTSeq count table to RPKM value using GFF/GTF
9.0 years ago by
Devon Ryan
105k
10,053 results • Page
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