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Comment: C: TPM for miRNAs
9.2 years ago by Devon Ryan 105k
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Comment: C: RNA-Seq without replicate using Kallisto
9.2 years ago by Devon Ryan 105k
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Answer: A: Extract lower limit of pvalue less than 2.2*10^-16
9.2 years ago by Devon Ryan 105k
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9.9k
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Comment: C: How to merge (or perform left soins) on GRange objects?
9.2 years ago by Devon Ryan 105k
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4.5k
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Comment: C: RNA-Seq without replicate using Kallisto
9.2 years ago by Devon Ryan 105k
2
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2.7k
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Comment: C: Sending files to Galaxy
9.2 years ago by Devon Ryan 105k
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2.7k
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Comment: C: Sending files to Galaxy
9.2 years ago by Devon Ryan 105k
1
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2.7k
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Comment: C: Sending files to Galaxy
9.2 years ago by Devon Ryan 105k
1
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2.7k
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Comment: C: Sending files to Galaxy
9.2 years ago by Devon Ryan 105k
1
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3.2k
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Comment: C: How to map BAM/SAM files to genes with abundance levels?
9.2 years ago by Devon Ryan 105k
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2.0k
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Comment: C: Coping with a label imbalance in DESeq2
9.2 years ago by Devon Ryan 105k
1
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4.6k
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Comment: C: FeatureCounts Assertion `l_name < 100' failed.
9.2 years ago by Devon Ryan 105k
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1
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3.2k
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Comment: C: How to map BAM/SAM files to genes with abundance levels?
9.2 years ago by Devon Ryan 105k
1
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1
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4.5k
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Comment: C: RNA-Seq without replicate using Kallisto
9.2 years ago by Devon Ryan 105k
1
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1.4k
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Comment: C: Making a "reference" proteome from RNA-seq data
9.2 years ago by Devon Ryan 105k
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4.5k
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Comment: C: RNA-Seq without replicate using Kallisto
9.2 years ago by Devon Ryan 105k
3
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2.5k
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Answer: A: number of grouping affect log2 fold change in DESeq2 analysis?
9.2 years ago by Devon Ryan 105k
16
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1
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5.7k
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News: Samtools/htslib/bcftools 1-3 released
htslib samtools bcftools
updated 2.7 years ago by 45k • written 10.0 years ago by 105k
1
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6.7k
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Answer: A: Pol II chip-seq data analysis
9.2 years ago by Devon Ryan 105k
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1.7k
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Comment: C: DESeq2 : Accounting for NA in the target file
9.2 years ago by Devon Ryan 105k
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2.5k
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Comment: C: How do I identify tissue specific genes for 1 small part of the brain?
9.2 years ago by Devon Ryan 105k
2
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1
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2.5k
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Comment: C: How do I identify tissue specific genes for 1 small part of the brain?
9.2 years ago by Devon Ryan 105k
2
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2.3k
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Comment: C: total newbie staring into headlights
9.2 years ago by Devon Ryan 105k
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1
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4.1k
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Comment: C: show the names of the genes on the Y axis on the heatmap Deeptools
9.2 years ago by Devon Ryan 105k
1
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1
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4.1k
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Answer: A: show the names of the genes on the Y axis on the heatmap Deeptools
9.2 years ago by Devon Ryan 105k
1
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3.5k
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Answer: A: Samtools issues with bai files
9.2 years ago by Devon Ryan 105k
2
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3.3k
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Comment: C: Am I using Tophat2 correctly? Segment-based junction search error keeps coming
9.2 years ago by Devon Ryan 105k
1
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3.9k
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Comment: C: what do negative values from bigWigAverageOverBed output mean?
9.2 years ago by Devon Ryan 105k
1
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4.1k
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Comment: C: Small percentage of overlapping chip-seq peaks
9.2 years ago by Devon Ryan 105k
1
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1
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3.9k
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Answer: A: what do negative values from bigWigAverageOverBed output mean?
9.2 years ago by Devon Ryan 105k
4
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1
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14k
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Answer: A: edgeR: no residual df: Cannot estimate dispersion
9.2 years ago by Devon Ryan 105k
2
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1
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2.7k
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Answer: A: Multithreading Python3 + Samtools
9.2 years ago by Devon Ryan 105k
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1
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2.1k
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Answer: A: DGE for non model
9.2 years ago by Devon Ryan 105k
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1
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3.9k
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Comment: C: different BED Format for peak calling
9.2 years ago by Devon Ryan 105k
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2
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3.9k
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Answer: A: different BED Format for peak calling
9.2 years ago by Devon Ryan 105k
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2.3k
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Comment: C: Need help : Coordinates for my RNA seq. reads corresponding to the reference gen
9.2 years ago by Devon Ryan 105k
1
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4.1k
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Comment: C: Small percentage of overlapping chip-seq peaks
9.2 years ago by Devon Ryan 105k
1
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2.7k
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Answer: A: UCSC Transcriptome File
9.2 years ago by Devon Ryan 105k
3
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2.2k
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Answer: A: Targeted RNAseq Analysis
9.2 years ago by Devon Ryan 105k
2
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1
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3.7k
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Comment: C: Does normalization/pooling in library prep affect read counts after sequencing?
9.2 years ago by Devon Ryan 105k
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1.9k
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Answer: A: Illumina data on CLC Genomics workbench
9.2 years ago by Devon Ryan 105k
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4.2k
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Comment: C: How to visualize read depth based on genomic location
9.2 years ago by Devon Ryan 105k
1
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2.9k
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Answer: A: cuffdiff "value_1" & "value_2", are they mean FPKM values from replicates for ea
9.2 years ago by Devon Ryan 105k
0
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0
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7.8k
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Comment: C: H3K4Me3 ChIP-Seq signal at promoter
9.2 years ago by Devon Ryan 105k
4
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1
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3.7k
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Answer: A: Does normalization/pooling in library prep affect read counts after sequencing?
9.2 years ago by Devon Ryan 105k
3
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3.1k
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Answer: A: bwa mem algorithm filter secondary alignment
9.2 years ago by Devon Ryan 105k
0
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4.2k
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Comment: C: get correlation matrix from principal component analysis in python
9.2 years ago by Devon Ryan 105k
0
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1
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7.8k
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Comment: C: H3K4Me3 ChIP-Seq signal at promoter
9.2 years ago by Devon Ryan 105k
0
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1
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4.2k
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Comment: C: How to visualize read depth based on genomic location
9.2 years ago by Devon Ryan 105k
0
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1
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4.8k
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Comment: C: Use Hypergeometric analysis to model data from RNAseq
9.2 years ago by Devon Ryan 105k
10,053 results • Page 79 of 202
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