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Comment: C: Problem viewing a bigWig file on UCSC browser - any debugging solutions?
9.6 years ago by Devon Ryan 105k
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2.6k
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Comment: C: Genome Browsers with BAM viewing capabilitites - Debian
9.6 years ago by Devon Ryan 105k
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3.5k
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Answer: A: How do I make a bigwig file from a matrix of counts?
9.6 years ago by Devon Ryan 105k
4
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2.3k
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Answer: A: FPKM cutoff based on data from one treatment?
9.6 years ago by Devon Ryan 105k
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6.2k
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Comment: C: Splice Junction file intersection with genome annotation
9.6 years ago by Devon Ryan 105k
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5.7k
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Comment: C: how to use htslib to convert fastq to bam file
9.6 years ago by Devon Ryan 105k
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5.9k
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Comment: C: DESeq2 time course experiments: how to make plots for specific genes?
9.6 years ago by Devon Ryan 105k
2
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1
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5.9k
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Answer: A: DESeq2 time course experiments: how to make plots for selected genes?
9.6 years ago by Devon Ryan 105k
2
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1
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2.6k
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Comment: C: Genome Browsers with BAM viewing capabilitites - Debian
9.6 years ago by Devon Ryan 105k
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0
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5.7k
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Comment: C: Very low mapping rate of a bam file, reasons?
9.6 years ago by Devon Ryan 105k
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3.4k
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Comment: C: Problem in installing Maker
9.6 years ago by Devon Ryan 105k
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1
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3.4k
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Comment: C: Problem in installing Maker
9.6 years ago by Devon Ryan 105k
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2
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3.4k
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Comment: C: Problem in installing Maker
9.6 years ago by Devon Ryan 105k
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0
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2.0k
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Answer: A: SRA Fastq files encoding
9.6 years ago by Devon Ryan 105k
1
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2
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3.1k
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Comment: C: Downloading data from ENCODE
9.6 years ago by Devon Ryan 105k
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4.8k
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Comment: C: Low DE genes in DESeq2
9.6 years ago by Devon Ryan 105k
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1.6k
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Comment: C: RNA-Seq pipeline error
9.6 years ago by Devon Ryan 105k
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1
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4.8k
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Comment: C: Low DE genes in DESeq2
9.6 years ago by Devon Ryan 105k
2
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1
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18k
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Comment: C: fasta - reverse complement sequence
9.6 years ago by Devon Ryan 105k
1
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0
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4.3k
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Answer: A: samtools -F 0x2 corrupts the file
9.6 years ago by Devon Ryan 105k
1
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1
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5.6k
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Answer: A: samtools flagstat interpretation
9.6 years ago by Devon Ryan 105k
2
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1
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3.3k
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Comment: C: One Stop Solution for NGS Data Analysis
9.6 years ago by Devon Ryan 105k
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23k
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Comment: C: Current state-of-the-art for RNA-Seq gene / transcript expression quantification
9.6 years ago by Devon Ryan 105k
3
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18k
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Answer: C: Saving unmapped reads from STAR
9.6 years ago by Devon Ryan 105k
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2.8k
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Comment: C: Difference in total normalized counts for replicates - DeSeq2
9.6 years ago by Devon Ryan 105k
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3.2k
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Comment: C: Blast or mapper ?
9.6 years ago by Devon Ryan 105k
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4.7k
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Comment: C: Insert size in RNA-Seq library
9.6 years ago by Devon Ryan 105k
2
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2
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55k
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Comment: C: Is there a Lims that doesn't suck?
9.6 years ago by Devon Ryan 105k
2
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2.4k
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Answer: A: Is there any reason to analyze plus/minus strands separately in bisulfite seq/me
9.6 years ago by Devon Ryan 105k
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1
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55k
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Comment: C: Is there a Lims that doesn't suck?
9.6 years ago by Devon Ryan 105k
1
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1
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55k
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Comment: C: Is there a Lims that doesn't suck?
9.6 years ago by Devon Ryan 105k
4
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5.7k
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Answer: A: flagstats bam file
9.6 years ago by Devon Ryan 105k
5
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5.8k
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Answer: A: GC content calculation for Genes
9.6 years ago by Devon Ryan 105k
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1
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4.9k
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Comment: C: Java or C++ (which side should I choose)
9.6 years ago by Devon Ryan 105k
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4.5k
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Comment: C: List Species Names In Local Mysql Ensembl Database Via Pycogent?
9.6 years ago by Devon Ryan 105k
2
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2.0k
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Answer: A: Rsamtool or Rbamtools function to view the number of reads between a range
9.6 years ago by Devon Ryan 105k
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0
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3.1k
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Comment: C: HELP with FastQC Webpage in Galaxy
9.6 years ago by Devon Ryan 105k
1
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1
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4.8k
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Comment: C: Noisy ChIPSeq data
9.6 years ago by Devon Ryan 105k
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1
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2.0k
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Comment: C: Compute bin boundaries from a received script only shows chromosome 1 instead of
9.6 years ago by Devon Ryan 105k
0
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1
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3.1k
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Comment: C: HELP with FastQC Webpage in Galaxy
9.6 years ago by Devon Ryan 105k
0
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1
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2.0k
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Comment: C: Compute bin boundaries from a received script only shows chromosome 1 instead of
9.6 years ago by Devon Ryan 105k
1
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0
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5.5k
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Answer: A: UCSC hg38 gene ID conversion to gene symbol
9.6 years ago by Devon Ryan 105k
0
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1
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3.1k
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Comment: C: Chip-Seq (Transcription Factor) data resources
9.6 years ago by Devon Ryan 105k
3
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0
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19k
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Comment: C: Command to extract SNPs from VCF file using bcftool
9.6 years ago by Devon Ryan 105k
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1
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3.8k
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Comment: C: detection of in/del in sanger sequencing
9.6 years ago by Devon Ryan 105k
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2
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3.8k
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Answer: A: detection of in/del in sanger sequencing
9.6 years ago by Devon Ryan 105k
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1.6k
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Comment: C: DiffBind warning in Galaxy
9.6 years ago by Devon Ryan 105k
0
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0
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1.6k
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Answer: A: DiffBind warning in Galaxy
9.6 years ago by Devon Ryan 105k
2
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1
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3.1k
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Answer: A: Chip-Seq (Transcription Factor) data resources
9.6 years ago by Devon Ryan 105k
14
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0
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6.7k
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Comment: C: Bioinformatics freelancers needed
9.6 years ago by Devon Ryan 105k
10,053 results • Page 94 of 202
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