User: gabrielpoccia
gabrielpoccia • 0
- Reputation:
- 0
- Status:
- New User
- Last seen:
- 1 week, 2 days ago
- Joined:
- 6 months ago
- Email:
- g************@gmail.com
Profile information, website and location are not shown for new users.
This helps us discourage the inappropriate use of our site.
Posts by gabrielpoccia
<prev
• 5 results •
page 1 of 1 •
next >
0
votes
2
answers
129
views
2
answers
... Oh, you saved my life! If you allow me, one last question. Some of my proteins are encoded by a whole genome CDs. In the GP file it appears as "/coded_by="join(WAAD01021866.1:<231469..231602, etc ". When I download this file (fasta) using the efetch, I get the whole genome splitted in the protein ...
written 5 weeks ago by
gabrielpoccia • 0
0
votes
2
answers
129
views
2
answers
... Can you download the GP this way? ...
written 5 weeks ago by
gabrielpoccia • 0
0
votes
2
answers
129
views
2
answers
... I noticed later that I could download the fasta using the IPG database, but what I really need is the GP file, because I'll need later the taxa information and the CDs IDs. But I thing this sequences do have some problems, I tried taking by hand some CDs IDs and tried to download the nucleotide Fast ...
written 5 weeks ago by
gabrielpoccia • 0
4
votes
2
answers
129
views
2
answers
... I'm trying to download some protein sequences using Entrez through command line. However, altough 'esearch' command finds my proteins (searching by ID), the 'efetch' don't return anything. I've tried both gp and fasta formats.
Here are some example IDs:
**GCB61038,
GCB69151,
GCC23899,
GCC32047,
M ...
written 6 weeks ago by
gabrielpoccia • 0
• updated
6 weeks ago by
Pierre Lindenbaum ♦ 134k
0
votes
0
answers
174
views
0
answers
... I'm trying to run psicoffee mode on Ubuntu 18.04, but it returns the error:
17633 -- WARNING:
Impossible to find BLAST TemplatesCheck that your blast server is properly installed [See documentation][FATAL:T-COFFEE]
I have already updated Perl and installed XML::Simple. I didn't try running on loca ...
written 6 months ago by
gabrielpoccia • 0
Latest awards to gabrielpoccia
No awards yet. Soon to come :-)
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 1892 users visited in the last hour