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Posts by gkunz
... Hi Jared, Thanks for taking the time to respond! Below is the code I am using to generate differential peaks. It is basically just what is outlined in the DiffBind vignette. You were correct to assume I was not providing anything to the peaks argument of the dba.count function and this does seem ...
Alternative/Incorrect DiffBind outputs for each contrast when providing entire vs. partial datasheet
... Hello, I am attempting to use DiffBind to identify differential peaks between groups in my experiment. I have 10 groups in my experiment with 3 replicates per group. This allows for the possibility for 45 unique comparisons. Through the help of the DIffBind vignettes and online resources I have bee ...
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