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Posts by LabCoatNomad
Comment: A: tximeta error (coldata)
... I think I see the problem with your code BUT even when corrected I didn't get the desired output from tximeta I ended up just using `quantmerge` to combine my salmon outputs and imported that as a count matrix because it was way easier. ...
... what sequencing machine platform and machine do you plan on using for single cell? if you are doing illumnia NextSeq or NovaSeq keep in mind that under loading a lane can be just as bad as over loading a lane. 50 cells is far short. You will either need a lot of samples at 50 cells each OR pool wit ...
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