User: khan

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khan100
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New User
Location:
Germany
Last seen:
5 years ago
Joined:
5 years, 11 months ago
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a**********@yahoo.com

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Posts by khan

<prev • 19 results • page 1 of 2 • next >
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Denosing Mirna Microarray Data From Blood Samples
... Hi all, I have miRNA microarray data from from blood sample. after normalization I saw quite different expression patterns for the same type of cancer among different patients(which I would expect to see at least some consistent expression pattern). I want to find hidden pattern inside of this dat ...
bioinformatics genomic mira microarray written 5.5 years ago by khan100 • updated 5.2 years ago by QVINTVS_FABIVS_MAXIMVS2.2k
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Comment: C: Microarray Chip And Array
... @ Sean Davis, thanks. I know. but I have to go ahead somehow. do you have review paper about microarry paltform which lot's of chips or array are printed in one glass ? like affymatrix technology ...
written 5.5 years ago by khan100
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Comment: C: Microarray Chip And Array
... @David Westergaard , I' edited . ...
written 5.5 years ago by khan100
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Microarray Chip And Array
... Hi, I have micorarray expression data set.it's for around 100 samples. I don't know exactly which kind of microarray platform are used. but I have problem in understanding some information about the dataset. the data set are from college and he is not available anymore . herehttp://s21.postimg.o ...
bioinformatics genomic microarray genomics bioinformatician written 5.5 years ago by khan100 • updated 5.5 years ago by Sean Davis25k
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Ensemble Identifier Of Mirna
... Hi, I have miRNA microarray expression data. I want to do gene set enrichment analysis on this data set. in order to do that, I need to have ENSEMBL Identifier of my miRNAs. how can I convert ID of my miRNAs to ENSEMBL Identifier (e.g. ENSGO....11543) ? my miRNA ids are like : hsa-miR-616 ...
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T-Test And P-Values For Microarray Expression Data
... Hi all, I have microarray expression matrix : columns are different cancers and the rows are my gene. I want to detect the artifcats in my data sets, in other word, I want to see, whether the over-under expression of genes are by chance or they have some biological reasons. How can I test this with ...
R bioconductor microarray bioinformatics written 5.6 years ago by khan100 • updated 5.6 years ago by Sean Davis25k
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Looking For Recommendations For Getting Started With Gene Regulatory Networks And Network Inference Models
... Does anybody knows good reference or review papers for building graphical model of gene regulatory network and inference form the graphical model? I'm new in this field, so I want to start with somethings that give me overall and comperhensive picture for the topic. ...
genomics graphs written 5.6 years ago by khan100 • updated 5.6 years ago by Istvan Albert ♦♦ 80k
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Answer: A: Identifying Tf Of Co-Expressed Genes
... I have a list of micRNA genes and I'm looking for there putative TF's. does anybody knows database/ webserver or tools which might help in prediction of TF of micRNA ? I tried flowing, but there were not helpful : http://www.geneontology.org/ http://www.umm.uni-heidelberg.de/apps/zmf/mirwalk/ htt ...
written 5.6 years ago by khan100
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Comment: C: Linearity In Gene Expression And Correlation Analysis
... thanks dpryan. one more thing. I have buch of micRNA genes, but for 85% of them I don't have TF. is there any tools or webserver which predict the TF of micRNA ? ...
written 5.6 years ago by khan100
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Comment: C: Linearity In Gene Expression And Correlation Analysis
... good, thanks, so what is good criteria instead of correlation analysis for finding co-expressed genes in microarray study ? ...
written 5.6 years ago by khan100

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