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2
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Comment: Comment: Efficient querying of genomic reference databases with gget
4 months ago by pomodoro_sinensis ▴ 80
2
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1
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310
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How are intron-containing transcripts captured in snRNA-seq?
snRNA-seq
updated 7 months ago by 9.9k • written 7 months ago by ▴ 80
0
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0
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239
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Adding counts from two barcodes in anndata object
scRNA-seq anndata
8 months ago by pomodoro_sinensis ▴ 80
0
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0
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175
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What is a read generation model?
reads
9 months ago by pomodoro_sinensis ▴ 80
6
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1
reply
1.9k
views
Gzip output of fasterq-dump
SRA fasterq-dump
updated 10 months ago by 13k • written 10 months ago by ▴ 80
0
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0
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443
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Comment: Comment: GEO scRNA-seq entry with cell type information?
11 months ago by pomodoro_sinensis ▴ 80
0
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2
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443
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GEO scRNA-seq entry with cell type information?
scRNA-seq
11 months ago by pomodoro_sinensis ▴ 80
0
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1
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855
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Does SCVI automatically use highly variable genes?
scRNA-seq SCVI Highly variable genes
updated 11 months ago by • 0 • written 19 months ago by ▴ 80
0
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1
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417
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What is each sample?
scRNA-seq
18 months ago by pomodoro_sinensis ▴ 80
0
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1
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469
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Comment: C: Where can I find the raw data for this GSE entry?
19 months ago by pomodoro_sinensis ▴ 80
0
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3
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469
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Where can I find the raw data for this GSE entry?
download raw GSE
19 months ago by pomodoro_sinensis ▴ 80
0
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1
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890
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Comment: C: How to add "transcript" feature to a gtf file?
20 months ago by pomodoro_sinensis ▴ 80
0
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0
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890
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Comment: C: How to add "transcript" feature to a gtf file?
20 months ago by pomodoro_sinensis ▴ 80
0
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1
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890
views
Comment: C: How to add "transcript" feature to a gtf file?
20 months ago by pomodoro_sinensis ▴ 80
8
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7
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890
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How to add "transcript" feature to a gtf file?
gtf
20 months ago by pomodoro_sinensis ▴ 80
1
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2
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385
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What gene mouse IDs are these?
gene mouse ID
updated 20 months ago by 65k • written 20 months ago by ▴ 80
1
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7
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1.4k
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Is anybody experiencing problems downloading from the SRA?
downloads
updated 20 months ago by 20 • written 22 months ago by ▴ 80
0
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0
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670
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Comment: C: Unable to find this E coli genome
20 months ago by pomodoro_sinensis ▴ 80
0
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1
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670
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Comment: C: Unable to find this E coli genome
20 months ago by pomodoro_sinensis ▴ 80
0
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0
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670
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Comment: C: Unable to find this E coli genome
20 months ago by pomodoro_sinensis ▴ 80
0
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2
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670
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Comment: C: Unable to find this E coli genome
20 months ago by pomodoro_sinensis ▴ 80
0
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6
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670
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Unable to find this E coli genome
E coli genome ensembl bacteria download
updated 20 months ago by ★ 20k • written 20 months ago by ▴ 80
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0
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583
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Comment: C: How to choose the appropriate gtf file?
20 months ago by pomodoro_sinensis ▴ 80
1
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2
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583
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How to choose the appropriate gtf file?
gtf genome human
20 months ago by pomodoro_sinensis ▴ 80
0
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0
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424
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How do you add up the results from two barcodes in an anndata object?
scRNA-seq anndata
22 months ago by pomodoro_sinensis ▴ 80
0
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0
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1.4k
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Comment: C: Is anybody experiencing problems downloading from the SRA?
22 months ago by pomodoro_sinensis ▴ 80
0
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0
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1.4k
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Comment: C: Is anybody experiencing problems downloading from the SRA?
22 months ago by pomodoro_sinensis ▴ 80
0
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1
reply
645
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Comment: C: How can I find the position of a sequence in a fastq file
23 months ago by pomodoro_sinensis ▴ 80
0
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1
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645
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Comment: C: How can I find the position of a sequence in a fastq file
23 months ago by pomodoro_sinensis ▴ 80
0
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1
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645
views
Comment: C: How can I find the position of a sequence in a fastq file
23 months ago by pomodoro_sinensis ▴ 80
0
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7
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645
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How can I find the position of a sequence in a fastq file
fastq sequence position find
updated 23 months ago by 121k • written 23 months ago by ▴ 80
0
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0
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984
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Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
23 months ago by pomodoro_sinensis ▴ 80
0
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0
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984
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Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
23 months ago by pomodoro_sinensis ▴ 80
0
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0
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984
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Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
23 months ago by pomodoro_sinensis ▴ 80
0
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2
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984
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Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
23 months ago by pomodoro_sinensis ▴ 80
1
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8
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984
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Why does this 10x scRNA-seq data set have one read instead of two reads?
10x scRNA-seq reads SRA
updated 23 months ago by 121k • written 23 months ago by ▴ 80
0
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1
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1.2k
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Comment: C: Problems with fastq-dump generating a single fastq file
23 months ago by pomodoro_sinensis ▴ 80
0
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1
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1.2k
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Comment: C: Problems with fastq-dump generating a single fastq file
23 months ago by pomodoro_sinensis ▴ 80
0
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1
reply
1.2k
views
Comment: C: Problems with fastq-dump generating a single fastq file
23 months ago by pomodoro_sinensis ▴ 80
0
votes
1
reply
1.2k
views
Comment: C: Problems with fastq-dump generating a single fastq file
23 months ago by pomodoro_sinensis ▴ 80
1
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11
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1.2k
views
Problems with fastq-dump generating a single fastq file
fastq-dump pair-ended fastq
updated 23 months ago by 121k • written 23 months ago by ▴ 80
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