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2
votes
1
reply
310
views
How are intron-containing transcripts captured in snRNA-seq?
snRNA-seq
updated 7 months ago by 9.9k • written 7 months ago by ▴ 80
0
votes
0
replies
240
views
Adding counts from two barcodes in anndata object
scRNA-seq anndata
9 months ago by pomodoro_sinensis ▴ 80
0
votes
0
replies
175
views
What is a read generation model?
reads
9 months ago by pomodoro_sinensis ▴ 80
6
votes
1
reply
2.0k
views
Gzip output of fasterq-dump
SRA fasterq-dump
updated 10 months ago by 13k • written 10 months ago by ▴ 80
0
votes
2
replies
443
views
GEO scRNA-seq entry with cell type information?
scRNA-seq
11 months ago by pomodoro_sinensis ▴ 80
0
votes
1
reply
855
views
Does SCVI automatically use highly variable genes?
scRNA-seq SCVI Highly variable genes
updated 12 months ago by • 0 • written 19 months ago by ▴ 80
0
votes
1
reply
418
views
What is each sample?
scRNA-seq
18 months ago by pomodoro_sinensis ▴ 80
0
votes
3
replies
470
views
Where can I find the raw data for this GSE entry?
download raw GSE
19 months ago by pomodoro_sinensis ▴ 80
8
votes
7
replies
893
views
How to add "transcript" feature to a gtf file?
gtf
20 months ago by pomodoro_sinensis ▴ 80
1
vote
2
replies
385
views
What gene mouse IDs are these?
gene mouse ID
updated 20 months ago by 65k • written 20 months ago by ▴ 80
1
vote
7
replies
1.5k
views
Is anybody experiencing problems downloading from the SRA?
downloads
updated 20 months ago by 20 • written 22 months ago by ▴ 80
0
votes
6
replies
672
views
Unable to find this E coli genome
E coli genome ensembl bacteria download
updated 20 months ago by ★ 20k • written 20 months ago by ▴ 80
1
vote
2
replies
583
views
How to choose the appropriate gtf file?
gtf genome human
20 months ago by pomodoro_sinensis ▴ 80
0
votes
0
replies
425
views
How do you add up the results from two barcodes in an anndata object?
scRNA-seq anndata
22 months ago by pomodoro_sinensis ▴ 80
0
votes
7
replies
648
views
How can I find the position of a sequence in a fastq file
fastq sequence position find
updated 23 months ago by 121k • written 23 months ago by ▴ 80
1
vote
8
replies
988
views
Why does this 10x scRNA-seq data set have one read instead of two reads?
10x scRNA-seq reads SRA
updated 23 months ago by 121k • written 23 months ago by ▴ 80
1
vote
11
replies
1.2k
views
Problems with fastq-dump generating a single fastq file
fastq-dump pair-ended fastq
updated 23 months ago by 121k • written 23 months ago by ▴ 80
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