User: JAB

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JAB0
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Posts by JAB

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Comment: C: The sequence databases have not been indexed. Please run 'prokka --setupdb' firs
... Thak you so much, I spent a lot of time looking for an explantion. ...
written 4 weeks ago by JAB0
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Comment: A: The sequence databases have not been indexed. Please run 'prokka --setupdb' firs
... Dear Mensur, Unfortunately I tried it scripting `prokka` --usegenus --genus vibrio --species parahaemolyticus --outdir VP81_ANNOTATED --prefix VP81 MULTIFASTA.fasta However it didn't work. I think it is possible that the trouble comes from the installation of Bioperl : > **Argument "1.7.7 ...
written 4 weeks ago by JAB0
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The sequence databases have not been indexed. Please run 'prokka --setupdb' first.
... Dear Friends, I am trying to annotate an assembled genome using prokka prokka MULTIFASTA.fa --usegenus --genus vibrio --species parahaemolyticus --outdir VP81_ANNOTATED --prefix VP81 When running the above command I get this error below: [02:21:09] This is prokka 1.14.5 [02:21:09] ...
prokka indexing sequence database written 4 weeks ago by JAB0

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