User: vipulwagh31

gravatar for vipulwagh31
Reputation:
0
Status:
New User
Last seen:
8 hours ago
Joined:
2 weeks, 4 days ago
Email:
v**********@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by vipulwagh31

<prev • 5 results • page 1 of 1 • next >
0
votes
0
answers
44
views
0
answers
Normalization method to be used when dealing with multiple datasets
... Hello everyone, I have multiple datasets from different platforms (Illumina and Affymetrix) and I have already performed a differential expression analysis for these datasets individually. I have used RMA and rsn normalization methods for Affymetrix and Illumina respectively. Now, I plan to perfo ...
normalization meta-analysis written 2 days ago by vipulwagh310 • updated 2 days ago by ATpoint41k
0
votes
1
answer
2.3k
views
1
answers
Comment: C: Bioconductor, how to select a subset of samples in an ExpressionSet?
... Well I did manage to convert the phenoData of g123 into character using 'lapply' function. And still I cannot filter gset based on the column source in the phenodata. Any more suggestions. My gset is a LumiBatch object can that be an issue? Thanks for your response again. ...
written 13 days ago by vipulwagh310
0
votes
1
answer
2.3k
views
1
answers
Comment: C: Bioconductor, how to select a subset of samples in an ExpressionSet?
... Here are the contents of the g123@phenoData@data$"Source". [1] CASE CASE CONTROL CASE CASE CASE CASE CONTROL CONTROL [10] CONTROL CASE CONTROL CONTROL CASE CASE CASE CASE CASE [19] CASE CONTROL CONTROL CONTROL CONTROL CONTRO ...
written 13 days ago by vipulwagh310 • updated 13 days ago by Kevin Blighe67k
0
votes
1
answer
2.3k
views
1
answers
Comment: C: Bioconductor, how to select a subset of samples in an ExpressionSet?
... Thanks for the response Kevin. I did try length(filter), and yet the out seems to be empty. ...
written 13 days ago by vipulwagh310
0
votes
1
answer
2.3k
views
1
answers
Comment: C: Bioconductor, how to select a subset of samples in an ExpressionSet?
... I did try to filter out the probes as suggested here, but the output turns out to be empty. I think it has to do with the different column names (GSMIDs) in eset and phenodata (Gender, Case/Control etc). Do I have to transpose one of them so that the filtering works? I plan to group the set in contr ...
written 13 days ago by vipulwagh310

Latest awards to vipulwagh31

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2267 users visited in the last hour