User: dani.tom

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Posts by dani.tom

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Comment: C: DESeq2 design for differential expression- 2 groups, 4 time points
... Thanks for your response. I'll clarify :) I'm interested in two results: 1. The DEGs that change in the control condition between time points 1,2 and 3 as compared to time point 0 (so that's 3 comparisons- control 1 vs. 0, control 2 vs. 0, control 3 vs. 0. 2. The DEGs that change in the treatmen ...
written 9 days ago by dani.tom0
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DESeq2 design for differential expression- 2 groups, 4 time points
... Hi everyone, I am currently using DESeq2 in R for performing differential expression analysis on a dataset consisting of 2 conditions (control+treatment) and 4 time points, and there are 3 biological replicates for each condition-timepoint. So the sample data is as in the attached samp.data image ...
R deseq rna-seq written 9 days ago by dani.tom0

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