User: mohamadrezakeshtkar

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Posts by mohamadrezakeshtkar

<prev • 14 results • page 1 of 2 • next >
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Comment: C: Annotate with homer
... Do you mean that you only need to work with ram4 Gb and above? Otherwise there is no point in working with homer? ...
written 7 weeks ago by mohamadrezakeshtkar0
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Answer: A: Why does annotate give an error?
... The problem was that when annotatePeaks.pl wanted to call other functions in other programs from within the program, it could not do so despite placing the bin folder path. And we have to make all the contents of the bin executable globally. Follow these steps to solve the problem: 1: In the term ...
written 7 weeks ago by mohamadrezakeshtkar0
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Annotate with homer
... Hi **In homer** If the RAM is not more than 4 Gb, what problems does the annotate run with and what information does it lose? And what is the difference between its output and normal? ...
annotate chip-seq written 7 weeks ago by mohamadrezakeshtkar0
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Comment: C: Why does annotate give an error?
... Thank you for your help and guidance. My problem was solved. ...
written 7 weeks ago by mohamadrezakeshtkar0
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Comment: C: Why does annotate give an error?
... In Figure 2, I added homer / bin to the PATH. export PATH=$PATH:/Desktop/homer/bin source ~/.profile ...
written 7 weeks ago by mohamadrezakeshtkar0
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Comment: C: Why does annotate give an error?
... Do you mean to add to the PATH for all files that are "not found"? ...
written 7 weeks ago by mohamadrezakeshtkar0
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Comment: C: Empty output when use HOMER annotatePeak.pl
... **How did you solve the problem? I have a problem here too** [enter link description here][1] [1]: https://www.biostars.org/p/476065/ ...
written 7 weeks ago by mohamadrezakeshtkar0
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Why does annotate give an error?
... Hello I want to annotate a peakfile But Why does the following command for annotate give the following error? While I added the executable path. According to the figure below Output file ...
annotate chip-seq written 7 weeks ago by mohamadrezakeshtkar0
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Comment: C: findPeaks in homer
... Now I was able to solve the above problem with your guidance. I did not add the executable path correctly. **Thank you very much.** ...
written 7 weeks ago by mohamadrezakeshtkar0
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Comment: C: findPeaks in homer
... apt-get ...
written 7 weeks ago by mohamadrezakeshtkar0

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