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How to extracts variants from multiple sequence alignment files?
clustalw biopython fasta fastq
updated 2.8 years ago by 21k • written 2.8 years ago by ▴ 20
1
vote
3
replies
1.3k
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ClustalW using Biopython
clustalw biopython fasta fastq
updated 2.8 years ago by 141k • written 2.8 years ago by ▴ 20
3
votes
6
replies
2.0k
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how to align fastq files to a fasta file using biopython to produce VCF file
fastq biopython fasta VCF
updated 2.8 years ago by 43k • written 2.8 years ago by ▴ 20
0
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4
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1.3k
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how to align many single end fastq files from the same study on each other without using any reference genome using python?
fastq fasta python VCF
updated 2.8 years ago by 141k • written 2.8 years ago by ▴ 20
0
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4
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1.0k
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how to merge two files in two columns using bash command lines
assembly fasta trinity
updated 2.8 years ago by ▴ 410 • written 2.8 years ago by ▴ 20
1
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1
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1.1k
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How to extract the shortest and the longest isoform from Trinity.fasta file?
assembly fasta trinity
updated 2.8 years ago by 3.6k • written 2.8 years ago by ▴ 20
8
votes
23
replies
4.3k
views
How to get the genes that contain the highest number of isoforms from a fasta file generated by trinity de novo?
assembly fasta trinity
updated 2.3 years ago by • 0 • written 2.8 years ago by ▴ 20
0
votes
1
reply
659
views
what is the length of sliding window in trimming options how to get it
fastq fasta SRA
updated 13 months ago by 43k • written 2.9 years ago by ▴ 20
1
vote
1
reply
979
views
Is there is a way to know that the sra data I'm interested in has a bad fastqc from sra database on ncbi before downloading it or before making fastq…
fastq fasta SRA
updated 13 months ago by 43k • written 2.9 years ago by ▴ 20
0
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4
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955
views
How to download the final reads of SRA data from NCBI using fastq-dumb
fastq fasta SRA
updated 13 months ago by 43k • written 2.9 years ago by ▴ 20
3
votes
2
replies
1.1k
views
Is the number of spots in SRA equal to the number of reads
fastq fasta SRA
updated 13 months ago by 43k • written 2.9 years ago by ▴ 20
1
vote
4
replies
3.5k
views
How to know if the sample from SRA is trimmed or un-trimmed
FASTQC NGS SRA FASTQ NCBI
updated 2.9 years ago by 82k • written 2.9 years ago by ▴ 20
1
vote
2
replies
1.3k
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How to print the header of bed file and the lines that belong to chromosome 2
fastq Bed_files fasta Bash
updated 2.8 years ago by 43k • written 2.9 years ago by ▴ 20
9
votes
9
replies
1.8k
views
Bash operations
Bash
updated 2.6 years ago by • 0 • written 2.9 years ago by ▴ 20
1
vote
2
replies
930
views
python
python
updated 3.0 years ago by 43k • written 3.0 years ago by ▴ 20
1
vote
6
replies
1.3k
views
Next Generation Sequencing: in which sequencing technology the read can Not exceed the fragment length?
NGS Nanopore Illumina Pacbio
updated 3.0 years ago by 15k • written 3.0 years ago by ▴ 20
16 results • Page 1 of 1
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