User: always_learning

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always_learning1.0k
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Posts by always_learning

<prev • 271 results • page 1 of 28 • next >
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Comment: C: low genomic inflation factor
... Anyone can shed some light on this? ...
written 19 days ago by always_learning1.0k
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Comment: C: genomic inflation factor calculation
... Which one the correct one? lambda <- median(chisq) / qchisq(0.5,1) or lambda <- median(chisq) / qchisq(0.456,1) ...
written 20 days ago by always_learning1.0k
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GENE BURDEN TEST
... Hi! What's the usual P-value cutoff for gene Based Association Burden test? I am running Linear Regression with Genes and associated phenotypes. I am using good quality nonsynonymous mutations for the Burden test. Regards, ...
exome gene burden written 26 days ago by always_learning1.0k
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Comment: C: How to annotate structural variants in VCF with esv/nsv identifiers
... yes Its manta. Primarily I am using MANTA for that. ...
written 5 months ago by always_learning1.0k
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Comment: C: How to annotate structural variants in VCF with esv/nsv identifiers
... Can you please help on this ? ...
written 5 months ago by always_learning1.0k
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Answer: A: How to annotate structural variants in VCF with esv/nsv identifiers
... Can you please help on this ? ...
written 5 months ago by always_learning1.0k
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Comment: A: Sift Or Polyphen
... Where can we download the Pre-built Polyphen Score? http://genetics.bwh.harvard.edu/pph2/dokuwiki/downloads Does it seem that I have to process these data to generate the final file? Regards, Najeeb ...
written 8 months ago by always_learning1.0k
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Comment: A: Sift Or Polyphen
... Where can we download the Pre-built Polyphen Score? http://genetics.bwh.harvard.edu/pph2/dokuwiki/downloads Does it seem that I have to process these data to generate the final file? Regards, Najeeb ...
written 8 months ago by always_learning1.0k
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Comment: C: Somatic indel calling with Pindel
... What if I have multiple pairs of data? Do I need to generate separate config file for each pair? Regards, Najeeb ...
written 8 months ago by always_learning1.0k
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Comment: C: How to convert maf file format to oncoPrint matrix (ComplexHeatmap package)?
... Hi Dear, Were you able to do that? I wanted to convert my MAF file in Matrix format for Oncoprint as well. Thanks Najeeb ...
written 9 months ago by always_learning1.0k

Latest awards to always_learning

Great Question 19 days ago, created a question with more than 5,000 views. For problem while Installing BCFtools/htslib
Great Question 6 weeks ago, created a question with more than 5,000 views. For problem while Installing BCFtools/htslib
Great Question 10 weeks ago, created a question with more than 5,000 views. For problem while Installing BCFtools/htslib
Great Question 4 months ago, created a question with more than 5,000 views. For problem while Installing BCFtools/htslib
Popular Question 6 months ago, created a question with more than 1,000 views. For getting GQ values with VCF using SAMTOOLS Mpileup
Scholar 8 months ago, created an answer that has been accepted. For A: Biomart error while convertint transcript ID.
Good Question 10 months ago, asked a question that was upvoted at least 5 times. For Gwas Stepwise Tutorial
Good Question 10 months ago, asked a question that was upvoted at least 5 times. For Annotation for SV and CNV
Popular Question 12 months ago, created a question with more than 1,000 views. For GERP score for all positions
Popular Question 12 months ago, created a question with more than 1,000 views. For GERP score for all positions
Popular Question 16 months ago, created a question with more than 1,000 views. For NGS Analysis Pipeline for Targeted Panel Data for SOMATIC tumours
Popular Question 17 months ago, created a question with more than 1,000 views. For NGS Analysis Pipeline for Targeted Panel Data for SOMATIC tumours
Guru 17 months ago, received more than 100 upvotes.
Popular Question 19 months ago, created a question with more than 1,000 views. For NGS Analysis Pipeline for Targeted Panel Data for SOMATIC tumours
Popular Question 21 months ago, created a question with more than 1,000 views. For NGS Analysis Pipeline for Targeted Panel Data for SOMATIC tumours
Popular Question 21 months ago, created a question with more than 1,000 views. For GERP score for all positions
Popular Question 21 months ago, created a question with more than 1,000 views. For NGS Analysis Pipeline for Targeted Panel Data for SOMATIC tumours
Epic Question 21 months ago, created a question with more than 10,000 views. For Homozygous Indel/Snp & Heterozygous Indel/Snp
Popular Question 23 months ago, created a question with more than 1,000 views. For NGS Analysis Pipeline for Targeted Panel Data for SOMATIC tumours
Popular Question 2.0 years ago, created a question with more than 1,000 views. For NGS Analysis Pipeline for Targeted Panel Data for SOMATIC tumours
Popular Question 2.0 years ago, created a question with more than 1,000 views. For NGS Analysis Pipeline for Targeted Panel Data for SOMATIC tumours
Good Question 2.0 years ago, asked a question that was upvoted at least 5 times. For Homozygous Indel/Snp & Heterozygous Indel/Snp
Student 2.1 years ago, asked a question with at least 3 up-votes. For Gwas Stepwise Tutorial
Popular Question 2.2 years ago, created a question with more than 1,000 views. For Running Delly for structural Variants
Popular Question 2.2 years ago, created a question with more than 1,000 views. For Running Delly for structural Variants

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