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194
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Machine Learning Classifiers on TCGA dataset(tpm_unstrand) gene expression data set
machine
RNASeq
python
learning
7 weeks ago by
Jakpa
▴ 50
2
votes
1
reply
327
views
How to iterate over Pandas Data frame and replace multiple rows
DataFrame
Python
Pandas
3 months ago by
Jakpa
▴ 50
2
votes
0
replies
327
views
Answer:
Answer: How to iterate over Pandas Data frame and replace multiple rows
3 months ago by
Jakpa
▴ 50
0
votes
0
replies
350
views
Comment:
Comment: ColData and rowData Sample_id mapping from TCGA database
3 months ago by
Jakpa
▴ 50
0
votes
3
replies
350
views
ColData and rowData Sample_id mapping from TCGA database
GeneExpression
R
TCGA
3 months ago by
Jakpa
▴ 50
0
votes
0
replies
253
views
Comment:
Comment: matrix' .'array'` to Matrix in R
4 months ago by
Jakpa
▴ 50
0
votes
0
replies
253
views
Comment:
Comment: matrix' .'array'` to Matrix in R
4 months ago by
Jakpa
▴ 50
0
votes
3
replies
253
views
matrix' .'array'` to Matrix in R
dataframe
Matrix
geneexpression
R
4 months ago by
Jakpa
▴ 50
0
votes
0
replies
567
views
Comment:
Comment: Synthetically valid name error in "MakeContracts" in Limma
4 months ago by
Jakpa
▴ 50
0
votes
1
reply
567
views
Comment:
Comment: Synthetically valid name error in "MakeContracts" in Limma
4 months ago by
Jakpa
▴ 50
4
votes
6
replies
567
views
Synthetically valid name error in "MakeContracts" in Limma
Matrix
limma
GeneExpression
R
4 months ago by
Jakpa
▴ 50
0
votes
1
reply
567
views
Comment:
Comment: Synthetically valid name error in "MakeContracts" in Limma
4 months ago by
Jakpa
▴ 50
0
votes
0
replies
471
views
Comment:
Comment: NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
updated 4 months ago by
rpolicastro
11k • written 4 months ago by
Jakpa
▴ 50
0
votes
0
replies
471
views
Comment:
Comment: NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
4 months ago by
Jakpa
▴ 50
0
votes
4
replies
471
views
NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
RNASeq
annotation
expression
Gene
R
updated 4 months ago by
rpolicastro
11k • written 4 months ago by
Jakpa
▴ 50
0
votes
1
reply
437
views
Comment:
Comment: Esembl geneID with Characters
4 months ago by
Jakpa
▴ 50
1
vote
3
replies
437
views
Esembl geneID with Characters
Esembl
annotation
GeneExpression
R
updated 4 months ago by
i.sudbery
16k • written 4 months ago by
Jakpa
▴ 50
0
votes
1
reply
2.0k
views
Comment:
Comment: need some help on how to use DESeq2 for TCGA data
4 months ago by
Jakpa
▴ 50
2
votes
1
reply
252
views
GEO data sample information error
Expression
Gene
Microarray
GEO
R
updated 4 months ago by
ATpoint
70k • written 4 months ago by
Jakpa
▴ 50
0
votes
1
reply
2.0k
views
Comment:
Comment: need some help on how to use DESeq2 for TCGA data
4 months ago by
Jakpa
▴ 50
1
vote
1
reply
285
views
Microarray Database
microarray
gene-expression
RNA
updated 3 months ago by
Ram
38k • written 4 months ago by
Jakpa
▴ 50
0
votes
0
replies
568
views
Comment:
Comment: How to download Gene expression data and associate clinical data from TCGA
5 months ago by
Jakpa
▴ 50
0
votes
3
replies
568
views
How to download Gene expression data and associate clinical data from TCGA
RNA-Seq
Gene-expression
TCGA
5 months ago by
Jakpa
▴ 50
0
votes
0
replies
264
views
plots of genomic annotations together with fictitious RNA binding protein data with python
python
annotation
matplotlib
20 months ago by
Jakpa
▴ 50
1
vote
0
replies
5.4k
views
Comment:
C: ColSideColors' must be a character vector of length ncol(x)
2.2 years ago by
Jakpa
▴ 50
0
votes
1
reply
5.4k
views
Comment:
C: ColSideColors' must be a character vector of length ncol(x)
2.2 years ago by
Jakpa
▴ 50
3
votes
7
replies
5.4k
views
ColSideColors' must be a character vector of length ncol(x)
R
heatmap.2
differential gene expression
2.2 years ago by
Jakpa
▴ 50
0
votes
0
replies
5.4k
views
Comment:
A: ColSideColors' must be a character vector of length ncol(x)
2.2 years ago by
Jakpa
▴ 50
0
votes
1
reply
5.4k
views
Comment:
C: ColSideColors' must be a character vector of length ncol(x)
2.2 years ago by
Jakpa
▴ 50
0
votes
0
replies
701
views
Comment:
C: Error in opening fastq.gz file
2.2 years ago by
Jakpa
▴ 50
0
votes
1
reply
701
views
Comment:
C: Error in opening fastq.gz file
2.2 years ago by
Jakpa
▴ 50
1
vote
5
replies
701
views
Error in opening fastq.gz file
linux
flexbar
Fastq
adapter-trimming
updated 6 days ago by
Ram
38k • written 2.2 years ago by
Jakpa
▴ 50
0
votes
0
replies
1.0k
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.2 years ago by
Jakpa
▴ 50
0
votes
0
replies
1.0k
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.2 years ago by
Jakpa
▴ 50
0
votes
0
replies
1.0k
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.2 years ago by
Jakpa
▴ 50
0
votes
2
replies
1.0k
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.2 years ago by
Jakpa
▴ 50
0
votes
0
replies
1.0k
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.2 years ago by
Jakpa
▴ 50
0
votes
8
replies
1.0k
views
Error massage when instantiating DEseq Dataset
differential Expression
sizefactors
DESeq
R
updated 2.2 years ago by
ATpoint
70k • written 2.2 years ago by
Jakpa
▴ 50
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