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194
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Machine Learning Classifiers on TCGA dataset(tpm_unstrand) gene expression data set
machine RNASeq python learning
7 weeks ago by Jakpa ▴ 50
2
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1
reply
327
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How to iterate over Pandas Data frame and replace multiple rows
DataFrame Python Pandas
3 months ago by Jakpa ▴ 50
2
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0
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327
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Answer: Answer: How to iterate over Pandas Data frame and replace multiple rows
3 months ago by Jakpa ▴ 50
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350
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Comment: Comment: ColData and rowData Sample_id mapping from TCGA database
3 months ago by Jakpa ▴ 50
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3
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350
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ColData and rowData Sample_id mapping from TCGA database
GeneExpression R TCGA
3 months ago by Jakpa ▴ 50
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253
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Comment: Comment: matrix' .'array'` to Matrix in R
4 months ago by Jakpa ▴ 50
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253
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Comment: Comment: matrix' .'array'` to Matrix in R
4 months ago by Jakpa ▴ 50
0
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3
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253
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matrix' .'array'` to Matrix in R
dataframe Matrix geneexpression R
4 months ago by Jakpa ▴ 50
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567
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Comment: Comment: Synthetically valid name error in "MakeContracts" in Limma
4 months ago by Jakpa ▴ 50
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1
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567
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Comment: Comment: Synthetically valid name error in "MakeContracts" in Limma
4 months ago by Jakpa ▴ 50
4
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6
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567
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Synthetically valid name error in "MakeContracts" in Limma
Matrix limma GeneExpression R
4 months ago by Jakpa ▴ 50
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1
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567
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Comment: Comment: Synthetically valid name error in "MakeContracts" in Limma
4 months ago by Jakpa ▴ 50
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0
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471
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Comment: Comment: NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
updated 4 months ago by 11k • written 4 months ago by ▴ 50
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471
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Comment: Comment: NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
4 months ago by Jakpa ▴ 50
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4
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471
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NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
RNASeq annotation expression Gene R
updated 4 months ago by 11k • written 4 months ago by ▴ 50
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1
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437
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Comment: Comment: Esembl geneID with Characters
4 months ago by Jakpa ▴ 50
1
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3
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437
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Esembl geneID with Characters
Esembl annotation GeneExpression R
updated 4 months ago by 16k • written 4 months ago by ▴ 50
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2.0k
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Comment: Comment: need some help on how to use DESeq2 for TCGA data
4 months ago by Jakpa ▴ 50
2
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1
reply
252
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GEO data sample information error
Expression Gene Microarray GEO R
updated 4 months ago by 70k • written 4 months ago by ▴ 50
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1
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2.0k
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Comment: Comment: need some help on how to use DESeq2 for TCGA data
4 months ago by Jakpa ▴ 50
1
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1
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285
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Microarray Database
microarray gene-expression RNA
updated 3 months ago by 38k • written 4 months ago by ▴ 50
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568
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Comment: Comment: How to download Gene expression data and associate clinical data from TCGA
5 months ago by Jakpa ▴ 50
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3
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568
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How to download Gene expression data and associate clinical data from TCGA
RNA-Seq Gene-expression TCGA
5 months ago by Jakpa ▴ 50
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0
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264
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plots of genomic annotations together with fictitious RNA binding protein data with python
python annotation matplotlib
20 months ago by Jakpa ▴ 50
1
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0
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5.4k
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Comment: C: ColSideColors' must be a character vector of length ncol(x)
2.2 years ago by Jakpa ▴ 50
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1
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5.4k
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Comment: C: ColSideColors' must be a character vector of length ncol(x)
2.2 years ago by Jakpa ▴ 50
3
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7
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5.4k
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ColSideColors' must be a character vector of length ncol(x)
R heatmap.2 differential gene expression
2.2 years ago by Jakpa ▴ 50
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0
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5.4k
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Comment: A: ColSideColors' must be a character vector of length ncol(x)
2.2 years ago by Jakpa ▴ 50
0
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1
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5.4k
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Comment: C: ColSideColors' must be a character vector of length ncol(x)
2.2 years ago by Jakpa ▴ 50
0
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0
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701
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Comment: C: Error in opening fastq.gz file
2.2 years ago by Jakpa ▴ 50
0
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1
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701
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Comment: C: Error in opening fastq.gz file
2.2 years ago by Jakpa ▴ 50
1
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5
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701
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Error in opening fastq.gz file
linux flexbar Fastq adapter-trimming
updated 6 days ago by 38k • written 2.2 years ago by ▴ 50
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1.0k
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Comment: C: Error massage when instantiating DEseq Dataset
2.2 years ago by Jakpa ▴ 50
0
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0
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1.0k
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Comment: C: Error massage when instantiating DEseq Dataset
2.2 years ago by Jakpa ▴ 50
0
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0
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1.0k
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Comment: C: Error massage when instantiating DEseq Dataset
2.2 years ago by Jakpa ▴ 50
0
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2
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1.0k
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Comment: C: Error massage when instantiating DEseq Dataset
2.2 years ago by Jakpa ▴ 50
0
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0
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1.0k
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Comment: C: Error massage when instantiating DEseq Dataset
2.2 years ago by Jakpa ▴ 50
0
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8
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1.0k
views
Error massage when instantiating DEseq Dataset
differential Expression sizefactors DESeq R
updated 2.2 years ago by 70k • written 2.2 years ago by ▴ 50
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