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Comment: Comment: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
4 weeks ago by bkleiboeker ▴ 320
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510
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Comment: Comment: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
5 weeks ago by bkleiboeker ▴ 320
2
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4
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510
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Help speeding up C++ algorithm to assign elemental composition to single m/z (=mass) value
Cpp Rcpp spectrometry mass
updated 4 weeks ago by 2.7k • written 5 weeks ago by ▴ 320
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291
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Comment: Comment: just one plot appears in the shiny application not all
11 weeks ago by bkleiboeker ▴ 320
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233
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Comment: Comment: A problem about saving Rstudio data matrix
12 weeks ago by bkleiboeker ▴ 320
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1
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570
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Comment: Comment: Inclusion of R script in shiny application
12 weeks ago by bkleiboeker ▴ 320
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2
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570
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Answer: Answer: Inclusion of R script in shiny application
12 weeks ago by bkleiboeker ▴ 320
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524
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Comment: Comment: Languages for Bioinformatics
3 months ago by bkleiboeker ▴ 320
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455
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Comment: Comment: how to use make.names commnad in r while using rbind function
3 months ago by bkleiboeker ▴ 320
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339
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Answer: Answer: How to make line graph with circles in R
3 months ago by bkleiboeker ▴ 320
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1
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590
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Comment: Comment: Merge common elements in R
3 months ago by bkleiboeker ▴ 320
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725
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Comment: Comment: SVA vs limma model
3 months ago by bkleiboeker ▴ 320
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725
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Answer: Answer: SVA vs limma model
3 months ago by bkleiboeker ▴ 320
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725
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Comment: Comment: SVA vs limma model
3 months ago by bkleiboeker ▴ 320
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246
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Answer: Answer: Filtering column in R
3 months ago by bkleiboeker ▴ 320
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426
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Comment: Comment: SRA toolkit
3 months ago by bkleiboeker ▴ 320
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769
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Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
3 months ago by bkleiboeker ▴ 320
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926
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Comment: Comment: Limma for batch effect correction
3 months ago by bkleiboeker ▴ 320
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769
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Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
3 months ago by bkleiboeker ▴ 320
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221
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Answer: Answer: differential expression analysis
updated 3 months ago by 39k • written 3 months ago by ▴ 320
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926
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Comment: Comment: Limma for batch effect correction
3 months ago by bkleiboeker ▴ 320
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239
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Comment: Comment: Error while running survival analysis ?
3 months ago by bkleiboeker ▴ 320
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262
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Comment: Comment: Limma contrasts for DEGs
4 months ago by bkleiboeker ▴ 320
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502
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Answer: Answer: Why am I getting only one common value when comparing two excel files?
4 months ago by bkleiboeker ▴ 320
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1.2k
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Comment: Comment: Heatmap by group in R
4 months ago by bkleiboeker ▴ 320
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1
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556
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Answer: Answer: Export glm and manova results from R in a publishable table
4 months ago by bkleiboeker ▴ 320
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1
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564
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Comment: Comment: Saccharomyces cerevisiae - mapping against transcriptome
4 months ago by bkleiboeker ▴ 320
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352
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Comment: Comment: Limma design matrix to find which interaction is significant
5 months ago by bkleiboeker ▴ 320
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925
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Comment: Comment: Proteomic Statistics - FDR vs p-value
5 months ago by bkleiboeker ▴ 320
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794
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Comment: Comment: R is assigning unique identifier to the same column names when reading in as a d
5 months ago by bkleiboeker ▴ 320
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0
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494
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Answer: Answer: CompleX heat Map
updated 5 months ago by 39k • written 5 months ago by ▴ 320
2
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1
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903
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Comment: Comment: Use tximport to merge and transform the transcript counts to gene counts
5 months ago by bkleiboeker ▴ 320
4
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1
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903
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Answer: Answer: Use tximport to merge and transform the transcript counts to gene counts
5 months ago by bkleiboeker ▴ 320
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505
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Comment: Comment: What can I do with pan-cancer RNA-seq data that only has FPKM value?
5 months ago by bkleiboeker ▴ 320
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714
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Comment: Comment: Pan-cancer RNA-seq data normalization
5 months ago by bkleiboeker ▴ 320
3
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1.1k
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Comment: Comment: R programmin RNA seq
5 months ago by bkleiboeker ▴ 320
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449
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Comment: Comment: using published genomic data
5 months ago by bkleiboeker ▴ 320
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909
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Comment: Comment: How do I subset data in R with a list of variable names?
5 months ago by bkleiboeker ▴ 320
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909
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Comment: Comment: How do I subset data in R with a list of variable names?
5 months ago by bkleiboeker ▴ 320
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1.3k
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Comment: Comment: How to make contrasts to find genes DE in one experimental group but NOT in othe
5 months ago by bkleiboeker ▴ 320
0
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1
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1.3k
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Comment: Comment: How to make contrasts to find genes DE in one experimental group but NOT in othe
5 months ago by bkleiboeker ▴ 320
11
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8
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1.3k
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How to make contrasts to find genes DE in one experimental group but NOT in others?
edgeR limma matrix design R
updated 5 months ago by ★ 6.1k • written 5 months ago by ▴ 320
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1.3k
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Comment: Comment: How to make contrasts to find genes DE in one experimental group but NOT in othe
5 months ago by bkleiboeker ▴ 320
0
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0
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586
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Comment: Comment: Strange results from limma output
5 months ago by bkleiboeker ▴ 320
1
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346
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Comment: Comment: warning when installing "AnnotationDbi"
6 months ago by bkleiboeker ▴ 320
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1
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364
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Comment: Comment: qPCR assay Triplicate Ct SD
7 months ago by bkleiboeker ▴ 320
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1
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676
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Comment: Comment: Comparing multiple groups in edgeR
7 months ago by bkleiboeker ▴ 320
1
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714
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Answer: Answer: Pan-cancer RNA-seq data normalization
7 months ago by bkleiboeker ▴ 320
0
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1
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446
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Comment: Comment: Design matrix for microarray experiment with covariates, cofactors, multiple fa
10 months ago by bkleiboeker ▴ 320
2
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3
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446
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Design matrix for microarray experiment with covariates, cofactors, multiple factors, and one treatment?
mircoarray R matrix design limma
updated 10 months ago by 2.7k • written 10 months ago by ▴ 320
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