Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
1
vote
0
replies
1.6k
views
Answer: Answer: Easy differential expression heatmap?
3.5 years ago by ivivek_ngs ★ 5.2k
0
votes
0
replies
1.6k
views
Answer: A: targeted RNA-Seq best practices
4.8 years ago by ivivek_ngs ★ 5.2k
3
votes
0
replies
8.9k
views
Answer: A: Seurat :Violin plot showing relative expression of select differentially express
4.8 years ago by ivivek_ngs ★ 5.2k
1
vote
0
replies
1.9k
views
Answer: A: Calculate statistically significant enrichment score for a specific transcriptio
updated 5.2 years ago by 88k • written 9.0 years ago by ★ 5.2k
0
votes
0
replies
7.8k
views
Answer: A: How can I convert a tab delemeted file to vcf format using vcf-annotate tool?
updated 5.6 years ago by 45k • written 10.2 years ago by ★ 5.2k
1
vote
1
reply
2.1k
views
Answer: A: RNA-seq: Is it worth to analyze case vs control separately to have a % similarit
6.2 years ago by ivivek_ngs ★ 5.2k
2
votes
1
reply
1.9k
views
Answer: A: Data selection for RNA-seq data analysis
6.2 years ago by ivivek_ngs ★ 5.2k
1
vote
0
replies
2.0k
views
Answer: A: Tools for qRT-PCR data analysis
6.2 years ago by ivivek_ngs ★ 5.2k
1
vote
1
reply
2.9k
views
Answer: A: What is the best way for applying Transfer learning on gene expression data ?
6.2 years ago by ivivek_ngs ★ 5.2k
2
votes
1
reply
6.9k
views
Answer: A: removeBatchEffect with or without log2 values
6.2 years ago by ivivek_ngs ★ 5.2k
0
votes
1
reply
2.5k
views
Answer: A: Is there a database which gives meta-level information of mutation(both nuclueot
updated 6.7 years ago by 45k • written 9.3 years ago by ★ 5.2k
3
votes
0
replies
12k
views
Answer: A: Problem In running read.Table function in R
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
1
vote
0
replies
2.0k
views
Answer: A: Probability of up/downregulation occuring by chance
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
0
votes
1
reply
15k
views
Answer: A: Generating an ADMIXTURE plot that stacks the different values of K using R
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
1
vote
1
reply
2.7k
views
Answer: A: defining function of list of genes
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
0
votes
0
replies
4.5k
views
Answer: A: How to identify consecutive (adjacent) genomic intervals
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
1
vote
0
replies
3.8k
views
Answer: A: package R for vcf file ??
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
1
vote
0
replies
5.6k
views
Answer: A: RNA seq results as fpkm
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
0
votes
0
replies
3.1k
views
Answer: A: How do I identify and differentiate between unidirectional and bidirectional pro
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
6
votes
2
replies
4.1k
views
Answer: A: ICGC Variant Calling Pipelines
updated 6.7 years ago by 45k • written 9.2 years ago by ★ 5.2k
0
votes
0
replies
2.7k
views
Answer: A: Drug set enrichment analysis
7.0 years ago by ivivek_ngs ★ 5.2k
1
vote
0
replies
1.4k
views
Answer: A: cancer immune subtypes based RNAseq data
7.1 years ago by ivivek_ngs ★ 5.2k
3
votes
1
reply
26k
views
Answer: A: Difference between tSNE and PCA analysis
7.3 years ago by ivivek_ngs ★ 5.2k
0
votes
0
replies
1.5k
views
Answer: A: Lnc RNA,RNA Seq
7.5 years ago by ivivek_ngs ★ 5.2k
0
votes
0
replies
1.6k
views
Answer: A: Motif seq in input seq and genes
7.6 years ago by ivivek_ngs ★ 5.2k
0
votes
1
reply
1.5k
views
Answer: A: RNA-sequencing dataset analyzed twice: good and poor estimate of false-positive
7.6 years ago by ivivek_ngs ★ 5.2k
1
vote
0
replies
2.5k
views
Answer: A: How to identify the important SNPs from several GWAS studies
7.7 years ago by ivivek_ngs ★ 5.2k
2
votes
1
reply
3.3k
views
Answer: A: Alternatives to TCGAbiolinks todownload the TCGA Data
7.7 years ago by ivivek_ngs ★ 5.2k
2
votes
0
replies
1.9k
views
Answer: A: Bias in hypergeometric test
7.7 years ago by ivivek_ngs ★ 5.2k
6
votes
1
reply
11k
views
Answer: A: How to find out the insert size in RNA seq data
7.7 years ago by ivivek_ngs ★ 5.2k
0
votes
1
reply
6.7k
views
Answer: A: Extracting UMI sequences from paired-end reads
7.7 years ago by ivivek_ngs ★ 5.2k
2
votes
1
reply
12k
views
Answer: Answer: n.sv number for batch effects in RNA-seq
7.7 years ago by ivivek_ngs ★ 5.2k
0
votes
1
reply
1.9k
views
Answer: A: ICGC control sample
7.8 years ago by ivivek_ngs ★ 5.2k
1
vote
1
reply
4.9k
views
Answer: A: Enrichment analysis: Which tool I should trust?
7.8 years ago by ivivek_ngs ★ 5.2k
3
votes
1
reply
8.2k
views
Answer: C: CNV calling with Control-FREEC? Significant calls
7.8 years ago by ivivek_ngs ★ 5.2k
0
votes
1
reply
7.2k
views
Answer: C: VEP and Annovar Annotation
updated 7.8 years ago by 24k • written 7.8 years ago by ★ 5.2k
0
votes
0
replies
3.3k
views
Answer: A: Taking surrogate variable into account before running PCA
7.8 years ago by ivivek_ngs ★ 5.2k
1
vote
1
reply
3.7k
views
Answer: A: Is it possible to run variant calling software in parallel, are there any Shell
7.8 years ago by ivivek_ngs ★ 5.2k
0
votes
0
replies
3.3k
views
Answer: A: Bioinformatician salary - Current market
7.9 years ago by ivivek_ngs ★ 5.2k
1
vote
0
replies
1.7k
views
Answer: A: How to find the neighbors of a sparce network using PPI network??
7.9 years ago by ivivek_ngs ★ 5.2k
2
votes
1
reply
1.5k
views
Answer: A: The best pipeline for SNP calling in aquaculture breeding
8.0 years ago by ivivek_ngs ★ 5.2k
2
votes
0
replies
1.7k
views
Answer: A: How to view the list of over or under expressed genes in any particular cancer?
8.0 years ago by ivivek_ngs ★ 5.2k
4
votes
1
reply
2.8k
views
Answer: C: Differentially Expressed Genes Analysis with RNA-Seq data
8.0 years ago by ivivek_ngs ★ 5.2k
1
vote
0
replies
2.6k
views
Answer: C: How to choose certain gene set to get known clusters?
8.1 years ago by ivivek_ngs ★ 5.2k
0
votes
0
replies
3.1k
views
Answer: A: BAM file processing in chunks in R
8.1 years ago by ivivek_ngs ★ 5.2k
2
votes
0
replies
2.2k
views
Answer: A: Is they any R package to download processed miRNA expression levle from TCGA?
8.1 years ago by ivivek_ngs ★ 5.2k
1
vote
0
replies
19k
views
Answer: A: heatmap.2 reorder branches
8.1 years ago by ivivek_ngs ★ 5.2k
0
votes
1
reply
2.8k
views
Answer: A: Read a text file into a list
8.1 years ago by ivivek_ngs ★ 5.2k
2
votes
1
reply
3.7k
views
Answer: A: convert VCF into bayescan format
8.1 years ago by ivivek_ngs ★ 5.2k
0
votes
0
replies
2.2k
views
Answer: A: bedtools shuffle with adjustment of GC ratio
8.1 years ago by ivivek_ngs ★ 5.2k
175 results • Page 1 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6