User: enci.xue96

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enci.xue960
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Posts by enci.xue96

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plink Map change location from hg18 to hg19
... I wanted to convert the map file from hg18 to hg19. I noticed the liftoverplink on github and the liftMap.py Script, but I run into this : Converting MAP file to UCSC BED file... SUCC: map->bed succ Lifting BED file... sh: 1: liftOver: not found Traceback (most recent call last): File "liftOv ...
liftover liftoverplink snp plnik written 5 weeks ago by enci.xue960
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Comment: C: How I do lift over a Plink bim file from Hg18 to Hg19.
... I have the same problem as you. Have you solved it and how ? my code like this: python liftOverPlink.py --map chr1.map --out lifted --chain hg18ToHg19.over.chain.gz but shows this: Converting MAP file to UCSC BED file... SUCC: map->bed succ Lifting BED file... sh: 1: liftOver: not found Traceb ...
written 5 weeks ago by enci.xue960

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