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Comment: Comment: Which method could be used for cross normailizing microarray samples from differ
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
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Comment: C: Where can I download a list of mtDNA haplogroup mutations?
10.1 years ago by Manvendra Singh ★ 2.2k
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Comment: C: How to convert a .gtf file to hints file?
10.1 years ago by Manvendra Singh ★ 2.2k
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1
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2.0k
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Comment: C: RNA-SEQ based transcription start and end site identification
10.1 years ago by Manvendra Singh ★ 2.2k
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1.8k
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Comment: Comment: how many ways do you know to visualise such a affymetrix microarray data ?
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
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5.2k
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Comment: Comment: cuffmerge error for loading annotation file
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
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5.5k
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Comment: Comment: Comparing gene expression profiles between species
updated 3.0 years ago by 45k • written 10.1 years ago by ★ 2.2k
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1
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14k
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Comment: C: What is the acceptable % of reads that map to no feature (in RNASeq)?
10.1 years ago by Manvendra Singh ★ 2.2k
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1
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2.2k
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Comment: Comment: Having problem running cuflinks v2.2.1 output
updated 3.0 years ago by 45k • written 10.1 years ago by ★ 2.2k
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5.5k
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Comment: Comment: Comparing gene expression profiles between species
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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1
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5.5k
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Comment: Comment: Comparing gene expression profiles between species
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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1
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3.2k
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Comment: Comment: Alternative microarray analysis
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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2
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7.1k
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Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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7.1k
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Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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1
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7.1k
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Comment: C: Removing identifier with "unavailable sequence" from FASTA file
updated 10.2 years ago by 45k • written 10.2 years ago by ★ 2.2k
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1
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7.1k
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Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
1
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0
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7.1k
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Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
0
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1
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7.1k
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Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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0
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3.2k
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Comment: C: Alternative microarray analysis
10.2 years ago by Manvendra Singh ★ 2.2k
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1
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2.4k
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Comment: Comment: combine affy HGU95Av2 and HGU133plus2
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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1
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10k
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Comment: C: Tophat error : Error: gtf_to_fasta returned an error.
10.2 years ago by Manvendra Singh ★ 2.2k
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1
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2.5k
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Comment: Comment: Error in using repeat mask genome for tophat2
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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0
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4.4k
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Comment: C: Low percentage of reads in Tophat, Is the any setting to improve?
10.2 years ago by Manvendra Singh ★ 2.2k
1
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1
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7.2k
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Comment: Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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7.2k
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Comment: Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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1
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3.0k
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Comment: C: pseudogene in Microarray DEGs analysis
10.2 years ago by Manvendra Singh ★ 2.2k
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1
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7.2k
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Comment: Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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0
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3.4k
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Comment: Comment: Correlating Protein expression with gene Expression
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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1
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4.0k
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Comment: C: Doubt related terms used in HOMER for ChipSeq Analysis
10.2 years ago by Manvendra Singh ★ 2.2k
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0
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2.2k
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Comment: Comment: Reference Genome file for assembly
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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0
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5.4k
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Comment: C: Calculating isoforms abundance using RNAseq data
10.2 years ago by Manvendra Singh ★ 2.2k
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1
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2.9k
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Comment: Comment: Can these fusion predictions by tophat be trusted
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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1
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2.1k
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Comment: Comment: identify sequences deep
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
1
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1
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2.1k
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Comment: Comment: identify sequences deep
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
1
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0
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1.6k
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Comment: Comment: Output RNA-seq reads that don't map to the transcriptome
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
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0
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6.9k
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Comment: Comment: How to remove Mitochondrial genes from Human annotation file (.GTF)?
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 2.2k
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1
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6.9k
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Comment: Comment: How to remove Mitochondrial genes from Human annotation file (.GTF)?
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 2.2k
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1
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7.7k
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Comment: C: What is the better transformation we should use to transform the expression leve
10.3 years ago by Manvendra Singh ★ 2.2k
0
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1
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7.7k
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Comment: Comment: What is the better transformation we should use to transform the expression leve
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 2.2k
0
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1
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7.7k
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Comment: C: What is the better transformation we should use to transform the expression leve
10.3 years ago by Manvendra Singh ★ 2.2k
1
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1
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7.7k
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Comment: C: What is the better transformation we should use to transform the expression leve
10.3 years ago by Manvendra Singh ★ 2.2k
0
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0
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8.3k
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Comment: Comment: same padj for all the genes after DEseq analysis
updated 3.1 years ago by 45k • written 10.3 years ago by ★ 2.2k
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0
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3.3k
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Comment: C: Error RNA-seq data, TOPHAT
10.3 years ago by Manvendra Singh ★ 2.2k
0
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1
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11k
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Comment: Comment: RNAseq heatmap.2 log2FC clustering
updated 3.1 years ago by 45k • written 10.3 years ago by ★ 2.2k
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0
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7.0k
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Comment: Comment: Filter out specific reads from FASTQ files
updated 3.1 years ago by 45k • written 10.3 years ago by ★ 2.2k
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0
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21k
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Comment: Comment: Advice on RNASeq analysis without biological replicates for differential gene ex
updated 3.1 years ago by 45k • written 10.3 years ago by ★ 2.2k
0
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1
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6.2k
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Comment: Comment: normalize on chip-seq data
updated 3.1 years ago by 45k • written 10.3 years ago by ★ 2.2k
1
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0
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9.4k
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Comment: C: Cuffmerge running error
10.3 years ago by Manvendra Singh ★ 2.2k
0
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0
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1.6k
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Comment: Comment: Too many suppressed reads
updated 3.1 years ago by 45k • written 10.3 years ago by ★ 2.2k
1
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2
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9.4k
views
Comment: Comment: Cuffmerge running error
updated 3.1 years ago by 45k • written 10.3 years ago by ★ 2.2k
238 results • Page 2 of 5
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