Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : comments
0
votes
0
replies
2.4k
views
Comment: Comment: Which method could be used for cross normailizing microarray samples from differ
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
4.6k
views
Comment: C: Where can I download a list of mtDNA haplogroup mutations?
9.9 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
2.7k
views
Comment: C: How to convert a .gtf file to hints file?
9.9 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
2.0k
views
Comment: C: RNA-SEQ based transcription start and end site identification
9.9 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
1.7k
views
Comment: Comment: how many ways do you know to visualise such a affymetrix microarray data ?
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
5.1k
views
Comment: Comment: cuffmerge error for loading annotation file
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
0
replies
5.3k
views
Comment: Comment: Comparing gene expression profiles between species
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
14k
views
Comment: C: What is the acceptable % of reads that map to no feature (in RNASeq)?
9.9 years ago by Manvendra Singh ★ 2.2k
1
vote
1
reply
2.0k
views
Comment: Comment: Having problem running cuflinks v2.2.1 output
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
0
replies
5.3k
views
Comment: Comment: Comparing gene expression profiles between species
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
5.3k
views
Comment: Comment: Comparing gene expression profiles between species
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
1
vote
1
reply
3.0k
views
Comment: Comment: Alternative microarray analysis
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
1
vote
2
replies
6.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
0
replies
6.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
6.6k
views
Comment: C: Removing identifier with "unavailable sequence" from FASTA file
updated 9.9 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
6.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
1
vote
0
replies
6.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
6.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
0
replies
3.0k
views
Comment: C: Alternative microarray analysis
9.9 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
2.4k
views
Comment: Comment: combine affy HGU95Av2 and HGU133plus2
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
9.9k
views
Comment: C: Tophat error : Error: gtf_to_fasta returned an error.
9.9 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
2.4k
views
Comment: Comment: Error in using repeat mask genome for tophat2
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
1
vote
0
replies
4.3k
views
Comment: C: Low percentage of reads in Tophat, Is the any setting to improve?
9.9 years ago by Manvendra Singh ★ 2.2k
1
vote
1
reply
6.9k
views
Comment: Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
0
replies
6.9k
views
Comment: Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
2.8k
views
Comment: C: pseudogene in Microarray DEGs analysis
9.9 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
6.9k
views
Comment: Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
0
replies
3.3k
views
Comment: Comment: Correlating Protein expression with gene Expression
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
3.8k
views
Comment: C: Doubt related terms used in HOMER for ChipSeq Analysis
9.9 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
2.2k
views
Comment: Comment: Reference Genome file for assembly
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
0
replies
5.1k
views
Comment: C: Calculating isoforms abundance using RNAseq data
9.9 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
2.7k
views
Comment: Comment: Can these fusion predictions by tophat be trusted
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
1
vote
1
reply
2.0k
views
Comment: Comment: identify sequences deep
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
1
vote
1
reply
2.0k
views
Comment: Comment: identify sequences deep
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
1
vote
0
replies
1.6k
views
Comment: Comment: Output RNA-seq reads that don't map to the transcriptome
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
0
votes
0
replies
6.7k
views
Comment: Comment: How to remove Mitochondrial genes from Human annotation file (.GTF)?
updated 2.8 years ago by 44k • written 10.0 years ago by ★ 2.2k
0
votes
1
reply
6.7k
views
Comment: Comment: How to remove Mitochondrial genes from Human annotation file (.GTF)?
updated 2.8 years ago by 44k • written 10.0 years ago by ★ 2.2k
0
votes
1
reply
7.5k
views
Comment: C: What is the better transformation we should use to transform the expression leve
10.0 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
7.5k
views
Comment: Comment: What is the better transformation we should use to transform the expression leve
updated 2.8 years ago by 44k • written 10.0 years ago by ★ 2.2k
0
votes
1
reply
7.5k
views
Comment: C: What is the better transformation we should use to transform the expression leve
10.0 years ago by Manvendra Singh ★ 2.2k
1
vote
1
reply
7.5k
views
Comment: C: What is the better transformation we should use to transform the expression leve
10.0 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
8.1k
views
Comment: Comment: same padj for all the genes after DEseq analysis
updated 2.8 years ago by 44k • written 10.0 years ago by ★ 2.2k
0
votes
0
replies
3.2k
views
Comment: C: Error RNA-seq data, TOPHAT
10.1 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
11k
views
Comment: Comment: RNAseq heatmap.2 log2FC clustering
updated 2.8 years ago by 44k • written 10.1 years ago by ★ 2.2k
0
votes
0
replies
6.8k
views
Comment: Comment: Filter out specific reads from FASTQ files
updated 2.8 years ago by 44k • written 10.1 years ago by ★ 2.2k
0
votes
0
replies
21k
views
Comment: Comment: Advice on RNASeq analysis without biological replicates for differential gene ex
updated 2.8 years ago by 44k • written 10.1 years ago by ★ 2.2k
0
votes
1
reply
6.0k
views
Comment: Comment: normalize on chip-seq data
updated 2.8 years ago by 44k • written 10.1 years ago by ★ 2.2k
1
vote
0
replies
9.0k
views
Comment: C: Cuffmerge running error
10.1 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
1.5k
views
Comment: Comment: Too many suppressed reads
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 2.2k
1
vote
2
replies
9.0k
views
Comment: Comment: Cuffmerge running error
updated 2.8 years ago by 44k • written 10.1 years ago by ★ 2.2k
238 results • Page 2 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6