User: just learning

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Comment: C: Merge two vcf's, keep only intersection of REF/ALT alleles
... Thank you for the reply! I was attempting to avoid using bcftools isec after the merge because it outputs four extremely large data sets- however if this is the only option I will work with it. ...
written 6 weeks ago by just learning0
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Merge two vcf's, keep only intersection of REF/ALT alleles
... Hi all, I would like to merge two vcf files chr1g.vcf.gz and chr1hk.vcf.gz. I would like the resulting file to have only the intersection of the two files upon merge. chr1g.vcf.gz excerpt: CHROM .POS ....ID... REF... ALT ... QUAL... FILTER....... INFO chr1 ...
vcf intersection merge bcftools vcftools written 6 weeks ago by just learning0 • updated 17 days ago by Elucidata120

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