User: Charly

gravatar for Charly
Charly50
Reputation:
50
Status:
New User
Location:
Last seen:
5 years, 6 months ago
Joined:
5 years, 8 months ago
Email:
c**********@yahoo.com

about me

Posts by Charly

<prev • 4 results • page 1 of 1 • next >
5
votes
3
answers
3.8k
views
3
answers
Convert Kegg Kgml To Graph
... Hello, I ran Kegg/Kaas module and the pathways in xml format through KGML. is there a tool out there which can convert this to a graph? I tried Visant but it always gives me some errors. Thank you ...
xml kegg graph written 5.5 years ago by Charly50 • updated 5.4 years ago by Haluk170
5
votes
1
answer
3.1k
views
1
answer
How To Get Kegg Pathway Interaction Network In A Tabular Format Easy To Manipulate?
... Hello, I want to do some differential pathways analysis using KEGG. I already ran the KEGG/KAAS module to get the pathways for my two samples. Now I may like to compare them through some automatic computational analysis. How can I download the pathways I get from KEGG to do this kind of statistic ...
differential analysis kegg statistics written 5.6 years ago by Charly50 • updated 3.8 years ago by Greg Medlock10
0
votes
1
answer
2.3k
views
1
answers
Comment: C: How To Do Pathway Analysis With Rna Data Which Are Not Pure
... Thank you dear Richard for your feedback. Unfortunately, I can not clean my reads because we don't know the different eukaryotes and prokaryotes organisms contaminating them. Since we don't have a genome or DNA data, it is difficult to use most of the software you suggested. At the moment, I am loo ...
written 5.7 years ago by Charly50
2
votes
1
answer
2.3k
views
1
answer
How To Do Pathway Analysis With Rna Data Which Are Not Pure
... Hello all, I have a problem where I will be so grateful for your assistance. We have some transcriptome (RNA) sequencing data of a “new” eukaryote species with no reference genome. The RNA data we have are not pure. We have two different groups of the Illumina reads: in the first group, the “new” ...
analysis written 5.7 years ago by Charly50 • updated 5.7 years ago by Richard Smith-Unna130

Latest awards to Charly

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1814 users visited in the last hour