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Posts by contacttomquinn
... Does anyone knows of a way to easily convert between the mass-spec database search result formats (specifically, converting from pep.XML to id.csv), preferably within the R environment? We have a series of pep.XML files which we would like to import into the Bioconductor package "isobar". However, t ...
... I am looking for a method of retrieving phyloP scores (a per base measurement of evolutionary conservation) using R, given a set of chromosomal coordinates. I have found databases hosted by the UCSC Genome Browser, but they have proved very unwieldy. Does anyone know of any packages or other tricks ...
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