User: lovenlong

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lovenlong10
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Posts by lovenlong

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Comment: C: Minimap2 generated a very large paf, and miniasm failed to get gfa, how to do wi
... It works, thank you. ...
written 8 months ago by lovenlong10
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Minimap2 generated a very large paf, and miniasm failed to get gfa, how to do with it ?
... Hi everyone, I'm trying to assemble a plant genome (~400 Mb) with ONT data (SumBase ~20 Gb, 36.5k reads, mean len=53k). Due to some reasons, I have to do the assembly with my Desktop (i5-7400, 16 GB RAM, 2 TB disk). I did overlap mapping with minimap2: minimap2 -x ava-ont -k15 -Xw5 -m100 -g10 ...
genome assembly written 8 months ago by lovenlong10

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