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1
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7
replies
950
views
Strange clustering of genes with circlize
circlize clustering
9 months ago by jonas.andersson ▴ 30
1
vote
13
replies
1.5k
views
Can you swap reference genome releases ?
grch38 Reference-genome patch
12 months ago by jonas.andersson ▴ 30
1
vote
3
replies
1.1k
views
Why is the fraction of mRNA transcripts captured per cell so low?
mRNA reverse-transcriptase 10x
updated 12 months ago by 43k • written 15 months ago by ▴ 30
3
votes
4
replies
1.3k
views
I don't understand the HDF5 file from 10x genomics scRNAseq
hdf5 10x
updated 12 months ago by 43k • written 23 months ago by ▴ 30
5
votes
6
replies
1.8k
views
How does the DNA-seq machine know which strand that is forward/reverse?
dna-seq
updated 2.4 years ago by 8.7k • written 2.4 years ago by ▴ 30
0
votes
7
replies
1.4k
views
Strange speed up in GATK LeftAlignIndels
GATK LeftAlignIndels
2.6 years ago by jonas.andersson ▴ 30
0
votes
0
replies
654
views
Sambamba markdup usage help
markdup sambamba
updated 2.6 years ago by 43k • written 2.6 years ago by ▴ 30
1
vote
4
replies
1.7k
views
Can I sort my bam files with Picard MergeSamFiles?
MergeSamFiles picard-tools SortSam
updated 2.7 years ago by ★ 1.9k • written 2.7 years ago by ▴ 30
0
votes
3
replies
1.5k
views
How can I make parsing big fasta with biopython SeqIO go faster?
fasta biopython seqio extract python
updated 3.1 years ago by 21k • written 3.1 years ago by ▴ 30
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