User: plafdesigns

gravatar for plafdesigns
plafdesigns30
Reputation:
30
Status:
New User
Location:
Last seen:
5 years, 2 months ago
Joined:
5 years, 2 months ago
Email:
p**********@gmail.com

about me

Posts by plafdesigns

<prev • 1 results • page 1 of 1 • next >
3
votes
5
answers
12k
views
5
answers
Answer: A: Discrepancy In Samtools Mpileup/Depth And Bedtools Genomecoveragebed Counts
... This happened to me too, but after playing around with both I realised that it's because samtools mpileup counted in properly mapped only, while bedtools used all the mappings. Solution: filter the .bam file first using samtools view -b -f 2 to get only mappings with properly mapped reads, then pas ...
written 5.2 years ago by plafdesigns30

Latest awards to plafdesigns

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 793 users visited in the last hour