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0
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2.1k
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Comment:
C: Which indication of a failure can be found in bwa-mem or samtools' output?
5.6 years ago by
serpalma.v
▴ 80
0
votes
1
reply
2.1k
views
Comment:
C: Which indication of a failure can be found in bwa-mem or samtools' output?
5.6 years ago by
serpalma.v
▴ 80
0
votes
0
replies
2.7k
views
Comment:
C: Adding read group to bam files from multiplexed samples
5.7 years ago by
serpalma.v
▴ 80
0
votes
1
reply
2.7k
views
Comment:
C: Adding read group to bam files from multiplexed samples
5.7 years ago by
serpalma.v
▴ 80
0
votes
0
replies
3.6k
views
Comment:
C: Fix per tile sequence quality?
5.7 years ago by
serpalma.v
▴ 80
0
votes
2
replies
3.6k
views
Fix per tile sequence quality?
fastqc
DNAseq
illumina
quality control
updated 5.7 years ago by
GenoMax
140k • written 5.7 years ago by
serpalma.v
▴ 80
0
votes
1
reply
2.6k
views
kmer content changes after trimming and removing adapters from reads
DNAseq
trimmomatic
fastqc
5.7 years ago by
serpalma.v
▴ 80
4
votes
2
replies
7.0k
views
Removing Illumina Single End PCR Primers and TruSeq Adapters
DNA-seq
primer
TruSeq
adapter removal
FastQC
updated 5.8 years ago by
GenoMax
140k • written 5.8 years ago by
serpalma.v
▴ 80
0
votes
0
replies
1000
views
Recomendations on setting a software pipeline to detect signatures of selection
sweep
positive selection
signatures of selection
6.1 years ago by
serpalma.v
▴ 80
0
votes
2
replies
1.7k
views
Differences in RNAseq Variant Calling and Allele Specific Expression
RNA-Seq
variant calling
allele specific expression
updated 12 months ago by
afei
• 0 • written 6.1 years ago by
serpalma.v
▴ 80
0
votes
0
replies
1.6k
views
Calling ASE using QuASAR without availble population allele frequency
Allele specific expression
SNP
VCF
MAF
updated 6.3 years ago by
Biostar
20 • written 6.4 years ago by
serpalma.v
▴ 80
2
votes
1
reply
1.5k
views
How to find unique mappability regions in the bovine genome?
SNP
cow
Assembly
updated 6.4 years ago by
Pierre Lindenbaum
160k • written 6.4 years ago by
serpalma.v
▴ 80
1
vote
0
replies
1.7k
views
Answer:
A: WASP criterion for discarding reads in unphased samples
6.5 years ago by
serpalma.v
▴ 80
2
votes
1
reply
1.7k
views
WASP criterion for discarding reads in unphased samples
WASP
RNA-Seq
allele-specific expression
6.5 years ago by
serpalma.v
▴ 80
2
votes
2
replies
1.3k
views
SNP annotated outside gene location (Variant Effect Predictor)
vep
SNP
variant effect predictor
ensembl
updated 6.6 years ago by
Denise CS
★ 5.2k • written 6.6 years ago by
serpalma.v
▴ 80
0
votes
0
replies
2.8k
views
Comment:
C: How to find the self aligned repeat region in human genome
6.7 years ago by
serpalma.v
▴ 80
0
votes
1
reply
2.0k
views
Comment:
C: Feasible Annotation of 4 million unique SNPs
6.7 years ago by
serpalma.v
▴ 80
4
votes
5
replies
2.0k
views
Feasible Annotation of 4 million unique SNPs
SNP
ASE
GATK
updated 6.7 years ago by
Emily
23k • written 6.7 years ago by
serpalma.v
▴ 80
0
votes
0
replies
2.0k
views
Comment:
C: Feasible Annotation of 4 million unique SNPs
6.7 years ago by
serpalma.v
▴ 80
0
votes
1
reply
1.5k
views
Chromosome Names in genome are incompatible with annotations
STAR
alignment
7.0 years ago by
serpalma.v
▴ 80
0
votes
3
replies
3.9k
views
basic concepts behind --sjdbOverhang (STAR)
star
sjdbOverhang
7.0 years ago by
serpalma.v
▴ 80
0
votes
1
reply
3.9k
views
Comment:
C: basic concepts behind --sjdbOverhang (STAR)
7.0 years ago by
serpalma.v
▴ 80
0
votes
1
reply
1.3k
views
Comment:
C: How to project the read count?(HiSeq2500, mouse genome, resequencing)
7.7 years ago by
serpalma.v
▴ 80
0
votes
3
replies
1.3k
views
How to project the read count?(HiSeq2500, mouse genome, resequencing)
SNP
genome
sequence
next-gen
sequencing
updated 7.7 years ago by
GenoMax
140k • written 7.7 years ago by
serpalma.v
▴ 80
0
votes
0
replies
1.2k
views
Comment:
C: Assigning time to data analysis (detection of signatures of selection)
7.7 years ago by
serpalma.v
▴ 80
0
votes
2
replies
1.2k
views
Assigning time to data analysis (detection of signatures of selection)
SNP
sequencing
next-gen
7.7 years ago by
serpalma.v
▴ 80
1
vote
2
replies
1.7k
views
What is the language of this mass spectrophotometry data processing output file
mass spectrophotometry
output
updated 8.0 years ago by
Pierre Lindenbaum
160k • written 8.0 years ago by
serpalma.v
▴ 80
2
votes
2
replies
5.2k
views
Exploratory data anaylsis to detect batch effects
batch-effect
microarray
updated 19 months ago by
Ram
43k • written 8.3 years ago by
serpalma.v
▴ 80
0
votes
2
replies
1.9k
views
What test to apply to detect genomic signatures of selection?
genetics
selection
signatures
population-genomics
updated 20 months ago by
Ram
43k • written 8.2 years ago by
serpalma.v
▴ 80
0
votes
0
replies
1.4k
views
Find gene IDs for affymetrix chip pd.porgene.1.1.st
microarray
updated 2.5 years ago by
Ram
43k • written 8.3 years ago by
serpalma.v
▴ 80
0
votes
1
reply
3.0k
views
How to interpret a pairwise distance matrices for X nr-SNPs sliding windows across the genome
SNP
sliding-window
updated 19 months ago by
Ram
43k • written 8.4 years ago by
serpalma.v
▴ 80
1
vote
2
replies
5.7k
views
topGO approach for a list a genes without expression
GO
bioconductor
R
mirna
updated 3.0 years ago by
Ram
43k • written 9.4 years ago by
serpalma.v
▴ 80
0
votes
0
replies
5.7k
views
Comment:
Comment: topGO approach for a list a genes without expression
updated 3.0 years ago by
Ram
43k • written 9.4 years ago by
serpalma.v
▴ 80
0
votes
0
replies
3.5k
views
Comment:
C: Max Length With Fastx Tookit
10.4 years ago by
serpalma.v
▴ 80
3
votes
5
replies
3.5k
views
Max Length With Fastx Tookit
fastx
length
updated 10.4 years ago by
Istvan Albert
100k • written 10.4 years ago by
serpalma.v
▴ 80
0
votes
1
reply
3.5k
views
Comment:
C: Max Length With Fastx Tookit
10.4 years ago by
serpalma.v
▴ 80
0
votes
0
replies
5.9k
views
P1 And A Adater Trimming And Mapping From Ion Torrent Reads
ion-torrent
trimming
10.4 years ago by
serpalma.v
▴ 80
87 results • Page
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