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Comment: Comment: Hisat2 splice sites extract blank files
7 months ago by a1ultima ▴ 860
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0
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65k
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Comment: Comment: Best Practices/Softwares To Calculate Ka/Ks Ratio
2.9 years ago by a1ultima ▴ 860
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0
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11k
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Comment: Comment: Aligning One Protein Sequence With A Multiple Sequence Alignment
3.3 years ago by a1ultima ▴ 860
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0
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18k
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Comment: Comment: Generating consensus sequence from bam file
3.7 years ago by a1ultima ▴ 860
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1
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18k
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Comment: Comment: Generating consensus sequence from bam file
3.7 years ago by a1ultima ▴ 860
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1
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18k
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Comment: Comment: Generating consensus sequence from bam file
3.7 years ago by a1ultima ▴ 860
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1.6k
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Comment: Comment: Converting samtools view <region> output (multiple reads) into single fasta sequ
3.7 years ago by a1ultima ▴ 860
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1
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1.6k
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Comment: Comment: Converting samtools view <region> output (multiple reads) into single fasta sequ
3.7 years ago by a1ultima ▴ 860
2
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4
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1.6k
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Converting samtools view <region> output (multiple reads) into single fasta sequence (consensus?)
coordinate dna samtools view consensus
3.7 years ago by a1ultima ▴ 860
0
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1
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10k
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Comment: C: Shannon entropy of a DNA motif?
updated 5.1 years ago by 44k • written 10.7 years ago by ▴ 860
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1
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10k
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Comment: C: Shannon entropy of a DNA motif?
updated 5.1 years ago by 44k • written 10.7 years ago by ▴ 860
1
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0
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3.6k
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Comment: C: Homologous Sequence Identity
updated 5.1 years ago by 44k • written 10.9 years ago by ▴ 860
7
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1
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10k
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Answer: A: Shannon entropy of a DNA motif?
updated 5.3 years ago by 44k • written 10.7 years ago by ▴ 860
3
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4
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2.5k
views
Number Of Species Is Restricted By Genome Combinatorics?
genome
updated 5.5 years ago by 20 • written 11.1 years ago by ▴ 860
1
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0
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65k
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Comment: C: Best Practices/Softwares To Calculate Ka/Ks Ratio
7.2 years ago by a1ultima ▴ 860
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0
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7.5k
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Comment: C: Ka/Ks Ratio For Within A Gene - Very Confused !!
7.8 years ago by a1ultima ▴ 860
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1
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5.0k
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Comment: C: Bio.Phylo.Paml.Codeml'S Results Parser Quietly Fails To Read All The Data
7.9 years ago by a1ultima ▴ 860
42
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5
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65k
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Answer: A: Best Practices/Softwares To Calculate Ka/Ks Ratio
7.9 years ago by a1ultima ▴ 860
0
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1
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15k
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Comment: C: What is GFF3 and how to extract genomic sequences from it?
7.9 years ago by a1ultima ▴ 860
0
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0
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14k
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Answer: A: How To Calculate The Number Of Potential Synonymous And Nonsynonynous Sites
8.0 years ago by a1ultima ▴ 860
1
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0
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65k
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Comment: C: Best Practices/Softwares To Calculate Ka/Ks Ratio
8.0 years ago by a1ultima ▴ 860
2
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6
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65k
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Comment: C: Best Practices/Softwares To Calculate Ka/Ks Ratio
8.0 years ago by a1ultima ▴ 860
1
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0
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65k
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Comment: C: Best Practices/Softwares To Calculate Ka/Ks Ratio
8.1 years ago by a1ultima ▴ 860
3
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8
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3.9k
views
List Species Names In Local Mysql Ensembl Database Via Pycogent?
ensembl database python mysql
updated 8.8 years ago by • 0 • written 11.0 years ago by ▴ 860
0
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0
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1.4k
views
Which ligands bind (are sensed by) these Odorant Binding Proteins?
odorant ligand protein
updated 2.5 years ago by 44k • written 9.1 years ago by ▴ 860
2
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2
replies
2.9k
views
Estimate gene flow between two populations?
population-genetics genetics gene-flow fst
updated 2.3 years ago by 44k • written 9.4 years ago by ▴ 860
0
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0
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5.0k
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Comment: C: Bio.Phylo.Paml.Codeml'S Results Parser Quietly Fails To Read All The Data
9.9 years ago by a1ultima ▴ 860
0
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0
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4.9k
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Comment: C: How Well Is A Masters/Phd In Computational Biology Accepted In The Computer Scie
9.9 years ago by a1ultima ▴ 860
1
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1
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2.9k
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Answer: Answer: Where can I download JASPAR_CORE_2014.meme or similar?
updated 3.8 years ago by 44k • written 10.3 years ago by ▴ 860
1
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2
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2.9k
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Where can I download JASPAR_CORE_2014.meme or similar?
transcriptionfactor database meme dna-motif
updated 3.8 years ago by 44k • written 10.3 years ago by ▴ 860
13
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6
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5.0k
views
Bio.Phylo.Paml.Codeml'S Results Parser Quietly Fails To Read All The Data
biopython python codeml parser read
updated 10.6 years ago by 20 • written 11.1 years ago by ▴ 860
0
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0
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4.3k
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Comment: C: Hierarchical tree based on phylogenetic profile matrix (presence/absence per spe
10.7 years ago by a1ultima ▴ 860
3
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2
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4.3k
views
Hierarchical tree based on phylogenetic profile matrix (presence/absence per species)?
Phylogenetic-profile Python Biopython R Tree
updated 3.3 years ago by 44k • written 10.7 years ago by ▴ 860
0
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0
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10k
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Comment: C: Shannon entropy of a DNA motif?
10.7 years ago by a1ultima ▴ 860
12
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10
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10k
views
Shannon entropy of a DNA motif?
entropy dna motif position-weight-matrix sequence
10.7 years ago by a1ultima ▴ 860
0
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0
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1.8k
views
Pycogent:Loadtree: Transform Tree Branch Lengths In Place?
tree
updated 10.7 years ago by 20 • written 10.8 years ago by ▴ 860
0
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0
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10k
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Comment: C: Shannon entropy of a DNA motif?
10.7 years ago by a1ultima ▴ 860
0
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0
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3.0k
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Comment: C: Which cut-off for collapsing this tree?
10.7 years ago by a1ultima ▴ 860
5
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2
replies
3.0k
views
Which cut-off for collapsing this tree?
homology distance collapse Newick orthology
updated 3.3 years ago by 44k • written 10.7 years ago by ▴ 860
21
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9
replies
7.9k
views
Collapse Clades In A Newick Tree With Average Distance To Tips < X
tree distance phylogeny
updated 3.2 years ago by 44k • written 10.8 years ago by ▴ 860
0
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0
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7.9k
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Comment: C: Collapse Clades In A Newick Tree With Average Distance To Tips < X
10.8 years ago by a1ultima ▴ 860
0
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0
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7.9k
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Comment: C: Collapse Clades In A Newick Tree With Average Distance To Tips < X
10.8 years ago by a1ultima ▴ 860
1
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0
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7.9k
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Comment: C: Collapse Clades In A Newick Tree With Average Distance To Tips < X
10.8 years ago by a1ultima ▴ 860
0
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0
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7.9k
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Comment: C: Collapse Clades In A Newick Tree With Average Distance To Tips < X
10.8 years ago by a1ultima ▴ 860
5
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4
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4.6k
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How Can I Re-Format My Dna Motifs' Position Weight Matrices (Pwms)?
dna motif matrix
10.9 years ago by a1ultima ▴ 860
2
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0
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4.6k
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Answer: A: How Can I Re-Format My Dna Motifs' Position Weight Matrices (Pwms)?
10.9 years ago by a1ultima ▴ 860
0
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0
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4.6k
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Comment: C: How Can I Re-Format My Dna Motifs' Position Weight Matrices (Pwms)?
10.9 years ago by a1ultima ▴ 860
0
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0
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8.8k
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Answer: A: Recommendations For Dn/Ds Ratio Analyses Software?
10.9 years ago by a1ultima ▴ 860
0
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0
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5.0k
views
Answer: A: How Do High Fst Compare With Dn/Ds?
10.9 years ago by a1ultima ▴ 860
6
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1
reply
3.6k
views
Answer: A: Homologous Sequence Identity
10.9 years ago by a1ultima ▴ 860
79 results • Page 1 of 2
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