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Comment:
Comment: How to trim ngs sequences according to the phred score using python/biopython
updated 13 months ago by
Ram
43k • written 9.9 years ago by
george.ry
★ 1.2k
1
vote
1
reply
7.2k
views
Comment:
Comment: How to trim ngs sequences according to the phred score using python/biopython
updated 13 months ago by
Ram
43k • written 9.9 years ago by
george.ry
★ 1.2k
0
votes
0
replies
12k
views
Comment:
C: extract columns from file based on header selected from 2nd file
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
george.ry
★ 1.2k
1
vote
0
replies
9.6k
views
Comment:
C: Do bioinformaticians often break molecular biologists' hearts by being the first
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
george.ry
★ 1.2k
2
votes
1
reply
1.6k
views
Comment:
C: <Data Munging> Convert Methylation Percentage to Number of Reads
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
george.ry
★ 1.2k
0
votes
1
reply
15k
views
Comment:
C: Subsample BAM to fixed number of alignments
updated 4.5 years ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
0
votes
1
reply
4.7k
views
Comment:
C: NaS (Nanopore Synthetic-long) help
updated 4.5 years ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
1
vote
1
reply
20k
views
Comment:
C: Counting mapped reads from a SAM file
updated 4.5 years ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
1
vote
1
reply
4.8k
views
Comment:
C: How do I generate all possible Newick Tree permutations for a set of species giv
6.5 years ago by
george.ry
★ 1.2k
1
vote
1
reply
4.8k
views
Comment:
C: How do I generate all possible Newick Tree permutations for a set of species giv
6.5 years ago by
george.ry
★ 1.2k
1
vote
1
reply
5.4k
views
Comment:
C: How to Run the Script for Extracting Splice Sites from the Gene Annotation File
6.6 years ago by
george.ry
★ 1.2k
0
votes
0
replies
3.1k
views
Comment:
C: Print line based on partial match
6.6 years ago by
george.ry
★ 1.2k
0
votes
1
reply
2.1k
views
Comment:
C: Parse file to remove two characters from the ends of a lot of lines
7.3 years ago by
george.ry
★ 1.2k
3
votes
1
reply
2.3k
views
Comment:
C: Multiple Sequence Alignment tools
7.5 years ago by
george.ry
★ 1.2k
1
vote
1
reply
2.4k
views
Comment:
C: Annotation of repeatative elements
7.6 years ago by
george.ry
★ 1.2k
2
votes
0
replies
9.9k
views
Comment:
C: What is the future of EMBL-EBI (and European bioinformatics in general) in case
7.8 years ago by
george.ry
★ 1.2k
0
votes
1
reply
14k
views
Comment:
C: Retrieve a subset of FASTA from large multi-FASTA file
7.9 years ago by
george.ry
★ 1.2k
3
votes
1
reply
7.9k
views
Comment:
C: Extracting last N bases of reads in FASTQ file
8.0 years ago by
george.ry
★ 1.2k
1
vote
1
reply
94k
views
Comment:
C: Best Way To Merge A Many Thousand Small Bam Files Into One Big Bam File?
8.1 years ago by
george.ry
★ 1.2k
1
vote
1
reply
94k
views
Comment:
C: Best Way To Merge A Many Thousand Small Bam Files Into One Big Bam File?
8.1 years ago by
george.ry
★ 1.2k
0
votes
0
replies
4.1k
views
Comment:
C: Installing Vicuna on Biolinux 8 - ncbi_tools++ make error
8.2 years ago by
george.ry
★ 1.2k
2
votes
1
reply
4.0k
views
Comment:
C: Fastest way from SRA to fastq PE reads
8.2 years ago by
george.ry
★ 1.2k
0
votes
1
reply
3.7k
views
Comment:
C: Converting sra to fastq
8.5 years ago by
george.ry
★ 1.2k
0
votes
0
replies
4.5k
views
Comment:
C: what is the fastest way to sort big bam files? (300Gb)
8.6 years ago by
george.ry
★ 1.2k
1
vote
1
reply
1.9k
views
Comment:
Comment: find matching rows based on snp ids
updated 18 months ago by
Ram
43k • written 8.7 years ago by
george.ry
★ 1.2k
1
vote
0
replies
1.9k
views
Comment:
Comment: find matching rows based on snp ids
updated 18 months ago by
Ram
43k • written 8.7 years ago by
george.ry
★ 1.2k
1
vote
0
replies
4.6k
views
Comment:
Comment: desktop bioinformatics platform specs
updated 17 months ago by
Ram
43k • written 8.8 years ago by
george.ry
★ 1.2k
1
vote
0
replies
5.9k
views
Comment:
Comment: How to extract reads supporting protein-coding gene splice junctions from STAR's
updated 16 months ago by
Ram
43k • written 8.8 years ago by
george.ry
★ 1.2k
0
votes
1
reply
2.9k
views
Comment:
Comment: eleredef error exit code 256 repeatmodeler
updated 15 months ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
0
votes
0
replies
15k
views
Comment:
Comment: Subsample BAM to fixed number of alignments
updated 15 months ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
0
votes
0
replies
4.7k
views
Comment:
Comment: NaS (Nanopore Synthetic-long) help
updated 15 months ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
0
votes
1
reply
4.7k
views
Comment:
Comment: NaS (Nanopore Synthetic-long) help
updated 15 months ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
0
votes
0
replies
2.0k
views
Comment:
Comment: tools for sequence separation
updated 15 months ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
3
votes
0
replies
34k
views
Comment:
C: samtools (conversion from .sam to .bam) and sorting of .bam file
8.9 years ago by
george.ry
★ 1.2k
3
votes
3
replies
34k
views
Comment:
Comment: samtools (conversion from .sam to .bam) and sorting of .bam file
updated 15 months ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
3
votes
1
reply
3.2k
views
Comment:
C: Minia bug: max rehashes reached: 65536000 (notify a developer)
8.9 years ago by
george.ry
★ 1.2k
2
votes
1
reply
3.4k
views
Comment:
Comment: STAR aligner pauses frequently during mapping
updated 14 months ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
0
votes
1
reply
12k
views
Comment:
Comment: deinterleave fastq file
updated 14 months ago by
Ram
43k • written 8.9 years ago by
george.ry
★ 1.2k
0
votes
0
replies
12k
views
Comment:
Comment: deinterleave fastq file
updated 14 months ago by
Ram
43k • written 9.0 years ago by
george.ry
★ 1.2k
2
votes
1
reply
12k
views
Comment:
Comment: deinterleave fastq file
updated 14 months ago by
Ram
43k • written 9.0 years ago by
george.ry
★ 1.2k
2
votes
0
replies
2.3k
views
Comment:
Comment: De novo assembly around 1 short length (<100bp) known sequence.
updated 21 months ago by
Ram
43k • written 9.0 years ago by
george.ry
★ 1.2k
0
votes
0
replies
25k
views
Comment:
Comment: searching reads with a certain sequence in fastq file
updated 22 months ago by
Ram
43k • written 9.0 years ago by
george.ry
★ 1.2k
0
votes
1
reply
3.1k
views
Comment:
Comment: Install bam-readcount with no sudo
updated 23 months ago by
Ram
43k • written 9.1 years ago by
george.ry
★ 1.2k
0
votes
0
replies
23k
views
Comment:
Comment: Python: count how many lines have a specific word
updated 23 months ago by
Ram
43k • written 9.2 years ago by
george.ry
★ 1.2k
1
vote
0
replies
5.1k
views
Comment:
Comment: adding RG tags to sorted bam file
updated 24 months ago by
Ram
43k • written 9.2 years ago by
george.ry
★ 1.2k
0
votes
0
replies
7.5k
views
Comment:
C: How to compute physical per-base coverage from WGS paired-end reads?
9.2 years ago by
george.ry
★ 1.2k
0
votes
0
replies
6.4k
views
Comment:
Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
george.ry
★ 1.2k
0
votes
1
reply
6.4k
views
Comment:
Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
george.ry
★ 1.2k
1
vote
1
reply
33k
views
Comment:
Comment: Fastq Quality Control Shootout
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
george.ry
★ 1.2k
0
votes
0
replies
33k
views
Comment:
Comment: Fastq Quality Control Shootout
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
george.ry
★ 1.2k
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