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Comment: C: Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
5.5 years ago by Biogeek ▴ 470
0
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0
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1.5k
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Comment: C: Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
5.5 years ago by Biogeek ▴ 470
0
votes
0
replies
1.5k
views
Comment: C: Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
5.5 years ago by Biogeek ▴ 470
1
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7
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1.5k
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Genome-aligned RNA-Seq: one treatment showing high% of unmapped reads:too short
RNA-Seq mapping low alignment GC content
5.5 years ago by Biogeek ▴ 470
0
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3
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3.0k
views
Going from BlastX to GO annotation
Annotation blastx GO ONTOLOGY
updated 5.6 years ago by 43k • written 8.2 years ago by ▴ 470
1
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3
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3.7k
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Biological variation within replicate groups, not much DE
biological variation
updated 5.6 years ago by 43k • written 8.2 years ago by ▴ 470
0
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0
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3.7k
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Comment: C: Biological variation within replicate groups, not much DE
updated 5.6 years ago by 43k • written 8.2 years ago by ▴ 470
1
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0
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1.8k
views
Pathway enrichment and interaction analysis of genes in plants?
interaction pathway enrichment
updated 5.6 years ago by 20 • written 7.6 years ago by ▴ 470
0
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0
replies
1.2k
views
Conditional reciprocal blast confusion
crb-blast
6.1 years ago by Biogeek ▴ 470
6
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2
replies
1.4k
views
QTL /linkage trait mapping
QTL / linkage trait mapping
updated 6.2 years ago by 6.5k • written 6.2 years ago by ▴ 470
0
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1
reply
10k
views
Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
6.5 years ago by Biogeek ▴ 470
0
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1
reply
10k
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Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
6.5 years ago by Biogeek ▴ 470
0
votes
2
replies
10k
views
Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
6.5 years ago by Biogeek ▴ 470
0
votes
1
reply
10k
views
Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
6.5 years ago by Biogeek ▴ 470
5
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13
replies
10k
views
Heatmap.2 - flip dendrogram so control group appears on LHS?
R heatmap
updated 6.5 years ago by ★ 1.1k • written 6.5 years ago by ▴ 470
0
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1
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10k
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Comment: C: Heatmap.2 - flip dendrogram so control group appears on LHS?
6.5 years ago by Biogeek ▴ 470
4
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4
replies
5.1k
views
choosing a suitable max intron size for STAR (plant alignment)
intron size star plants
updated 6.7 years ago by • 0 • written 7.7 years ago by ▴ 470
3
votes
3
replies
5.5k
views
Can you pool individuals to make 1 biological replicate?
biological-replicates RNA-Seq
updated 15 months ago by 43k • written 8.9 years ago by ▴ 470
0
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1
reply
1.5k
views
Easier way to filter contaminants based on protein similarity ?
diamond blastx uniprot trembl
updated 7.5 years ago by ★ 2.4k • written 7.5 years ago by ▴ 470
0
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1
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1.7k
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Comment: C: weird e-values with rapsearch
7.5 years ago by Biogeek ▴ 470
0
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0
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968
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Comment: C: swiss-prot size reduction
7.5 years ago by Biogeek ▴ 470
0
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0
replies
1.3k
views
Do I need to re-normalize?
RNA-Seq normalization
7.5 years ago by Biogeek ▴ 470
0
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0
replies
4.2k
views
Comment: C: Parsing uniprot .dat files
7.6 years ago by Biogeek ▴ 470
1
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9
replies
4.2k
views
Parsing uniprot .dat files
Annotation uniprot parsing
updated 7.6 years ago by ★ 2.4k • written 7.6 years ago by ▴ 470
1
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0
replies
3.7k
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Comment: C: STAR BAM into RSEM
7.6 years ago by Biogeek ▴ 470
1
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1
reply
3.7k
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Comment: C: STAR BAM into RSEM
7.6 years ago by Biogeek ▴ 470
9
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4
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3.7k
views
STAR BAM into RSEM
RSEM star forward-prob
updated 7.6 years ago by 104k • written 7.6 years ago by ▴ 470
0
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0
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2.5k
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Answer: A: HIGH BCV in EdgeR, any ideas?
7.6 years ago by Biogeek ▴ 470
1
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4
replies
2.5k
views
HIGH BCV in EdgeR, any ideas?
EdgeR BCV GLM high dispersion
7.6 years ago by Biogeek ▴ 470
0
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1
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2.5k
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Comment: C: HIGH BCV in EdgeR, any ideas?
7.6 years ago by Biogeek ▴ 470
1
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1
reply
3.5k
views
Comment: C: de novo transcriptome assembly
7.6 years ago by Biogeek ▴ 470
1
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0
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6.1k
views
Answer: A: I am really pissed off by the bioinformatics software world. Do/can we have a be
7.6 years ago by Biogeek ▴ 470
0
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1
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3.5k
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Comment: C: de novo transcriptome assembly
7.6 years ago by Biogeek ▴ 470
0
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1
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4.0k
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Comment: C: Time-series or pairwise comparison EdgeR - what's more suited?
7.6 years ago by Biogeek ▴ 470
0
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1
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3.5k
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Comment: C: de novo transcriptome assembly
7.6 years ago by Biogeek ▴ 470
1
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1
reply
3.5k
views
Comment: C: de novo transcriptome assembly
7.6 years ago by Biogeek ▴ 470
0
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0
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3.5k
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Comment: C: de novo transcriptome assembly
7.6 years ago by Biogeek ▴ 470
0
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1
reply
3.5k
views
Comment: C: de novo transcriptome assembly
7.6 years ago by Biogeek ▴ 470
1
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5
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4.0k
views
Time-series or pairwise comparison EdgeR - what's more suited?
DGE-analysis Time-series pairwise
updated 10 months ago by 43k • written 7.6 years ago by ▴ 470
0
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2
replies
1.7k
views
Experience with SOAP trans
soap trans de novo
updated 7.6 years ago by 20 • written 7.7 years ago by ▴ 470
0
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1
reply
4.5k
views
Comment: C: Finding orthologous gene within species
7.6 years ago by Biogeek ▴ 470
0
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0
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4.5k
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Comment: C: Finding orthologous gene within species
7.6 years ago by Biogeek ▴ 470
0
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1
reply
4.5k
views
Answer: A: Finding orthologous gene within species
7.6 years ago by Biogeek ▴ 470
1
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1
reply
2.7k
views
Answer: A: Determining Paired-end or Mate-pair insert length in De Novo Sequencing
7.6 years ago by Biogeek ▴ 470
0
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0
replies
4.2k
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Comment: C: Parsing uniprot .dat files
7.6 years ago by Biogeek ▴ 470
0
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1
reply
4.2k
views
Comment: C: Parsing uniprot .dat files
7.6 years ago by Biogeek ▴ 470
0
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1
reply
4.2k
views
Comment: C: Parsing uniprot .dat files
7.6 years ago by Biogeek ▴ 470
0
votes
1
reply
4.2k
views
Comment: C: Parsing uniprot .dat files
7.6 years ago by Biogeek ▴ 470
3
votes
7
replies
2.6k
views
tr2aacds memory issues
tr2aacds evidential gene memory issues
updated 7.7 years ago by ▴ 160 • written 7.7 years ago by ▴ 470
1
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1
reply
3.5k
views
Answer: A: merging all coordinate-sorted bam files for Trinity genome-guided approach?
7.7 years ago by Biogeek ▴ 470
187 results • Page 2 of 4
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