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1
vote
1
reply
2.1k
views
Answer:
Answer: Downloading a huge amount of Fastq files
21 months ago by
tomas4482
▴ 390
2
votes
0
replies
467
views
Answer:
Answer: Why does the CADD database have multiple lines for the same mutation/substitutio
21 months ago by
tomas4482
▴ 390
0
votes
1
reply
659
views
Answer:
Answer: Get nucleotide sequence of assembled RNA transcripts
21 months ago by
tomas4482
▴ 390
1
vote
0
replies
401
views
gene strand determined by flag in read1 and read2 should be intepreted differently?
samtools
RNA-seq
bam
updated 9 months ago by
Ram
43k • written 21 months ago by
tomas4482
▴ 390
1
vote
0
replies
1.8k
views
Comment:
Comment: how can we count that how many alignments contains a deletion?please guide me
21 months ago by
tomas4482
▴ 390
1
vote
1
reply
1.8k
views
Answer:
Answer: how can we count that how many alignments contains a deletion?please guide me
21 months ago by
tomas4482
▴ 390
3
votes
0
replies
371
views
Answer:
Answer: Colon cancer and single nucleotide variants
21 months ago by
tomas4482
▴ 390
0
votes
0
replies
3.5k
views
Answer:
Answer: STAR alignment getting KILLED in process. Please help!
21 months ago by
tomas4482
▴ 390
1
vote
1
reply
1.1k
views
Answer:
Answer: Why after normalization of scRNA-Seq data by DESeq2 the p-value of a large numbe
21 months ago by
tomas4482
▴ 390
0
votes
0
replies
41k
views
Comment:
Comment: Get chromosome sizes from fasta file
21 months ago by
tomas4482
▴ 390
1
vote
0
replies
909
views
Answer:
Answer: Seurat dotplot
23 months ago by
tomas4482
▴ 390
1
vote
1
reply
601
views
Does anyone know how to use Human Splicing Finder?
prediction
splicing
finder
HSF
human
23 months ago by
tomas4482
▴ 390
1
vote
0
replies
601
views
Answer:
Answer: Does anyone know how to use Human Splicing Finder?
23 months ago by
tomas4482
▴ 390
0
votes
0
replies
659
views
Answer:
Answer: Help with adding new ID names to read count
24 months ago by
tomas4482
▴ 390
0
votes
0
replies
453
views
Comment:
Comment: How to concatenate samtools output into one single file?
24 months ago by
tomas4482
▴ 390
2
votes
2
replies
453
views
How to concatenate samtools output into one single file?
samtools
updated 9 months ago by
Ram
43k • written 24 months ago by
tomas4482
▴ 390
1
vote
0
replies
378
views
Single exon has two distinct PSI in TCGA SpliceSeq.
SpliceSeq
alternative
splicing
skipping
exon
2.1 years ago by
tomas4482
▴ 390
0
votes
0
replies
2.6k
views
Answer:
Answer: BAM file reads mapping to multiple genes
2.4 years ago by
tomas4482
▴ 390
0
votes
0
replies
749
views
Comment:
Comment: integrated scRNA-seq dataset
2.4 years ago by
tomas4482
▴ 390
1
vote
2
replies
749
views
integrated scRNA-seq dataset
scRNA-seq
updated 2.4 years ago by
Friederike
8.9k • written 2.4 years ago by
tomas4482
▴ 390
0
votes
1
reply
723
views
Comment:
Comment: GC/AT base content crossed at the tail of read
2.4 years ago by
tomas4482
▴ 390
0
votes
3
replies
723
views
GC/AT base content crossed at the tail of read
DNA
sequence
WGS
WES
updated 2.4 years ago by
GenoMax
140k • written 2.4 years ago by
tomas4482
▴ 390
1
vote
7
replies
2.3k
views
featureCounts has low successfully assigned reads
RNA-seq
featureCounts
updated 8 months ago by
Juan Pablo
• 0 • written 2.4 years ago by
tomas4482
▴ 390
1
vote
1
reply
2.3k
views
Answer:
Answer: featureCounts has low successfully assigned reads
2.4 years ago by
tomas4482
▴ 390
0
votes
0
replies
2.9k
views
Answer:
Answer: Base recalibration in normal vs. tumor somatic variant calling in WXS data?
2.4 years ago by
tomas4482
▴ 390
0
votes
1
reply
2.3k
views
Comment:
Comment: featureCounts has low successfully assigned reads
2.4 years ago by
tomas4482
▴ 390
0
votes
0
replies
2.3k
views
Comment:
Comment: featureCounts has low successfully assigned reads
2.4 years ago by
tomas4482
▴ 390
1
vote
7
replies
3.6k
views
6 follow
Aspera: Failed to authenticate
ENA
aspera
2.4 years ago by
tomas4482
▴ 390
1
vote
0
replies
3.6k
views
Answer:
Answer: Aspera: Failed to authenticate
2.4 years ago by
tomas4482
▴ 390
0
votes
0
replies
3.6k
views
Comment:
Comment: Aspera: Failed to authenticate
2.5 years ago by
tomas4482
▴ 390
0
votes
1
reply
651
views
Search predicted peptides from proteomes
peptide
proteome
search
updated 2.5 years ago by
progistar
▴ 40 • written 2.5 years ago by
tomas4482
▴ 390
4
votes
4
replies
1.5k
views
SRA/ENA library layout is inconsistent with the data source
ENA
fastq
illumina
SRA
2.6 years ago by
tomas4482
▴ 390
2
votes
0
replies
1.5k
views
Answer:
Answer: SRA/ENA library layout is inconsistent with the data source
2.6 years ago by
tomas4482
▴ 390
1
vote
0
replies
1.5k
views
Comment:
Comment: SRA/ENA library layout is inconsistent with the data source
2.6 years ago by
tomas4482
▴ 390
1
vote
0
replies
1.5k
views
Comment:
Comment: SRA/ENA library layout is inconsistent with the data source
2.6 years ago by
tomas4482
▴ 390
1
vote
1
reply
837
views
Answer:
Answer: Single-cell RNA Seq on whole organ or whole tissue with known cell origins
2.6 years ago by
tomas4482
▴ 390
0
votes
0
replies
5.6k
views
Comment:
Comment: How to create interval list from reference fasta or dict file?
2.7 years ago by
tomas4482
▴ 390
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