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1.9k
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Comment:
Comment: Bowtie paired-end mapping: insert size issue
2.3 years ago by
biostart
▴ 370
0
votes
1
reply
1.9k
views
Comment:
Comment: Bowtie paired-end mapping: insert size issue
2.3 years ago by
biostart
▴ 370
0
votes
1
reply
1.9k
views
Comment:
Comment: Bowtie paired-end mapping: insert size issue
2.3 years ago by
biostart
▴ 370
0
votes
1
reply
1.9k
views
Comment:
Comment: Bowtie paired-end mapping: insert size issue
2.3 years ago by
biostart
▴ 370
0
votes
0
replies
2.8k
views
Comment:
C: Are HOMER aggregate proflles normalized to the read depth of each ChIP-seq sampl
updated 4.3 years ago by
Ram
43k • written 8.2 years ago by
biostart
▴ 370
0
votes
0
replies
2.3k
views
Comment:
C: SOLiD reads unreadable to Bowtie after unpacking from .sra archive [still open]
updated 4.3 years ago by
Ram
43k • written 8.2 years ago by
biostart
▴ 370
0
votes
0
replies
2.3k
views
Comment:
C: SOLiD reads unreadable to Bowtie after unpacking from .sra archive
updated 4.3 years ago by
Ram
43k • written 8.2 years ago by
biostart
▴ 370
0
votes
1
reply
1.8k
views
Comment:
C: Correlation of two ChIP-seq signals?
4.4 years ago by
biostart
▴ 370
0
votes
1
reply
1.8k
views
Comment:
C: Correlation of two ChIP-seq signals?
4.4 years ago by
biostart
▴ 370
0
votes
0
replies
1.8k
views
Comment:
C: Correlation of two ChIP-seq signals?
4.4 years ago by
biostart
▴ 370
0
votes
0
replies
2.0k
views
Comment:
C: Problem mapping paired-end Illumina reads
5.3 years ago by
biostart
▴ 370
0
votes
1
reply
2.0k
views
Comment:
C: Problem mapping paired-end Illumina reads
5.3 years ago by
biostart
▴ 370
0
votes
1
reply
2.0k
views
Comment:
C: Problem mapping paired-end Illumina reads
5.3 years ago by
biostart
▴ 370
0
votes
1
reply
2.0k
views
Comment:
C: Problem mapping paired-end Illumina reads
5.3 years ago by
biostart
▴ 370
0
votes
0
replies
2.0k
views
Comment:
C: Problem mapping paired-end Illumina reads
5.3 years ago by
biostart
▴ 370
0
votes
1
reply
2.0k
views
Comment:
C: Problem mapping paired-end Illumina reads
5.3 years ago by
biostart
▴ 370
0
votes
1
reply
2.0k
views
Comment:
C: Problem mapping paired-end Illumina reads
5.3 years ago by
biostart
▴ 370
0
votes
0
replies
1.1k
views
Comment:
C: Binding affinity DB out there?
5.3 years ago by
biostart
▴ 370
0
votes
0
replies
15k
views
Comment:
A: Add labels in the annotation bar of pheatmap
5.7 years ago by
biostart
▴ 370
0
votes
0
replies
2.1k
views
Comment:
C: MACS peak calling of paired-end reads in SAM format
5.7 years ago by
biostart
▴ 370
0
votes
0
replies
4.2k
views
Comment:
C: Peak calling for broad histone-modification regions
6.9 years ago by
biostart
▴ 370
0
votes
1
reply
4.2k
views
Comment:
C: Peak calling for broad histone-modification regions using MACS or HOMER
6.9 years ago by
biostart
▴ 370
0
votes
0
replies
4.9k
views
Comment:
C: What's the name in RepeatMasker for mouse major satellite repeats?
7.1 years ago by
biostart
▴ 370
1
vote
0
replies
1.2k
views
Comment:
C: bias correction (an example from ChIP-seq)
7.1 years ago by
biostart
▴ 370
0
votes
1
reply
2.9k
views
Comment:
C: Motif finding with HOMER
7.4 years ago by
biostart
▴ 370
0
votes
0
replies
2.1k
views
Comment:
C: find motif enrichment/depletion analysis
7.5 years ago by
biostart
▴ 370
0
votes
0
replies
3.5k
views
Comment:
C: Statistical test to compare the number of upregulated genes in a subgroup of gen
7.5 years ago by
biostart
▴ 370
0
votes
1
reply
3.5k
views
Comment:
C: Statistical test to compare the number of upregulated genes in a subgroup of gen
7.5 years ago by
biostart
▴ 370
0
votes
1
reply
3.5k
views
Comment:
C: Statistical test to compare the number of upregulated genes in a subgroup of gen
7.5 years ago by
biostart
▴ 370
1
vote
1
reply
2.1k
views
Comment:
C: Nucleosome Peak Callers
7.5 years ago by
biostart
▴ 370
0
votes
1
reply
3.1k
views
Comment:
C: Statistical test to compare expression change in a subgroup of genes versus all
7.5 years ago by
biostart
▴ 370
0
votes
0
replies
2.9k
views
Comment:
C: Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of
7.6 years ago by
biostart
▴ 370
0
votes
1
reply
2.9k
views
Comment:
C: Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of
7.6 years ago by
biostart
▴ 370
0
votes
1
reply
2.9k
views
Comment:
C: Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of
7.6 years ago by
biostart
▴ 370
0
votes
1
reply
2.9k
views
Comment:
C: Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of
7.6 years ago by
biostart
▴ 370
0
votes
0
replies
3.1k
views
Comment:
C: Statistical test to compare expression change in a subgroup of genes versus all
7.6 years ago by
biostart
▴ 370
0
votes
1
reply
3.1k
views
Comment:
C: Statistical test to compare expression change in a subgroup of genes versus all
7.6 years ago by
biostart
▴ 370
0
votes
0
replies
2.2k
views
Comment:
C: Convert fold changes of multiple transcripts of a given gene to a single value c
7.6 years ago by
biostart
▴ 370
0
votes
1
reply
2.2k
views
Comment:
C: Convert fold changes of multiple transcripts of a given gene to a single value c
7.6 years ago by
biostart
▴ 370
1
vote
1
reply
2.3k
views
Comment:
C: Converting CpG methylation calls to average genome coverage
7.9 years ago by
biostart
▴ 370
0
votes
0
replies
3.0k
views
Comment:
C: Bowtie mapping paired-end reads of different length
8.1 years ago by
biostart
▴ 370
0
votes
1
reply
3.0k
views
Comment:
C: Bowtie mapping paired-end reads of different length
8.1 years ago by
biostart
▴ 370
0
votes
1
reply
2.4k
views
Comment:
C: Separating gene list into chromatin domains
8.1 years ago by
biostart
▴ 370
0
votes
1
reply
2.4k
views
Comment:
C: Separating gene list into chromatin domains
8.1 years ago by
biostart
▴ 370
0
votes
2
replies
3.6k
views
Comment:
C: Gene Ontology without enrichment analysis
8.1 years ago by
biostart
▴ 370
0
votes
1
reply
18k
views
Comment:
C: GO analysis: DAVID vs GREAT vs GOrilla
8.2 years ago by
biostart
▴ 370
0
votes
0
replies
2.1k
views
Comment:
C: Problem mapping SOLiD reads with Bowtie1
8.2 years ago by
biostart
▴ 370
0
votes
2
replies
7.4k
views
Comment:
C: How to calculate enrichment P-value?
8.2 years ago by
biostart
▴ 370
2
votes
1
reply
5.4k
views
Comment:
C: BedTools can't find "hg19.genome"
8.2 years ago by
biostart
▴ 370
0
votes
0
replies
5.3k
views
Comment:
C: Merging many BAM files [solved]
8.2 years ago by
biostart
▴ 370
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