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Comment: C: Statistical test to compare expression change in a subgroup of genes versus all
7.5 years ago by biostart ▴ 370
2
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7
replies
3.1k
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Statistical test to compare expression change in a subgroup of genes versus all genes?
RNA-Seq
updated 7.5 years ago by 35k • written 7.6 years ago by ▴ 370
0
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0
replies
2.9k
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Comment: C: Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of
7.6 years ago by biostart ▴ 370
0
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1
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2.9k
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Comment: C: Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of
7.6 years ago by biostart ▴ 370
0
votes
1
reply
2.9k
views
Comment: C: Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of
7.6 years ago by biostart ▴ 370
0
votes
1
reply
2.9k
views
Comment: C: Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of
7.6 years ago by biostart ▴ 370
2
votes
8
replies
2.9k
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Mann-Whitney test -- is it applicable to compare log2 fold change in a subset of genes to all genes?
RNA-Seq
7.6 years ago by biostart ▴ 370
0
votes
0
replies
3.1k
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Comment: C: Statistical test to compare expression change in a subgroup of genes versus all
7.6 years ago by biostart ▴ 370
0
votes
1
reply
3.1k
views
Comment: C: Statistical test to compare expression change in a subgroup of genes versus all
7.6 years ago by biostart ▴ 370
9
votes
10
replies
2.2k
views
[solved] Convert fold changes of multiple transcripts of a given gene to a single value characterising this gene
RNA-Seq
7.6 years ago by biostart ▴ 370
0
votes
0
replies
2.2k
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Comment: C: Convert fold changes of multiple transcripts of a given gene to a single value c
7.6 years ago by biostart ▴ 370
0
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1
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2.2k
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Comment: C: Convert fold changes of multiple transcripts of a given gene to a single value c
7.6 years ago by biostart ▴ 370
1
vote
1
reply
2.3k
views
Comment: C: Converting CpG methylation calls to average genome coverage
7.9 years ago by biostart ▴ 370
4
votes
4
replies
2.3k
views
Converting CpG methylation calls to average genome coverage
DNA methylation BS-seq
updated 7.9 years ago by 20 • written 8.0 years ago by ▴ 370
1
vote
1
reply
3.2k
views
Answer: A: NGS analysis on windows
8.0 years ago by biostart ▴ 370
1
vote
4
replies
3.0k
views
[solved] Bowtie mapping paired-end reads of different length
ChIP-Seq
8.1 years ago by biostart ▴ 370
0
votes
0
replies
3.0k
views
Comment: C: Bowtie mapping paired-end reads of different length
8.1 years ago by biostart ▴ 370
0
votes
1
reply
3.0k
views
Comment: C: Bowtie mapping paired-end reads of different length
8.1 years ago by biostart ▴ 370
1
vote
0
replies
4.4k
views
Answer: A: How to do gene enrichment analysis?
8.1 years ago by biostart ▴ 370
0
votes
1
reply
2.9k
views
bedtools closest (output file format)
bedtools RNA-Seq ChIP-Seq
updated 8.1 years ago by 35k • written 8.1 years ago by ▴ 370
3
votes
7
replies
2.4k
views
Separating gene list into chromatin domains and analysing separately within each domain
RNA-Seq ChIP-Seq Hi-C
updated 8.1 years ago by 35k • written 8.1 years ago by ▴ 370
0
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1
reply
2.4k
views
Comment: C: Separating gene list into chromatin domains
8.1 years ago by biostart ▴ 370
0
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0
replies
1.7k
views
Answer: A: Reg: Changing outliers in RNASEQ
8.1 years ago by biostart ▴ 370
0
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1
reply
2.4k
views
Comment: C: Separating gene list into chromatin domains
8.1 years ago by biostart ▴ 370
0
votes
2
replies
3.6k
views
Comment: C: Gene Ontology without enrichment analysis
8.1 years ago by biostart ▴ 370
1
vote
2
replies
18k
views
Answer: A: GO analysis: DAVID vs GREAT vs GOrilla
8.1 years ago by biostart ▴ 370
0
votes
1
reply
18k
views
Comment: C: GO analysis: DAVID vs GREAT vs GOrilla
8.2 years ago by biostart ▴ 370
2
votes
0
replies
3.8k
views
Answer: Answer: topologically associating domains - TADs - sources?
updated 21 months ago by 43k • written 8.2 years ago by ▴ 370
0
votes
0
replies
2.1k
views
Comment: C: Problem mapping SOLiD reads with Bowtie1
8.2 years ago by biostart ▴ 370
1
vote
2
replies
2.1k
views
Problem mapping SOLiD reads with Bowtie1
sequencing ChIP-Seq
updated 21 months ago by 43k • written 8.2 years ago by ▴ 370
0
votes
2
replies
7.4k
views
Comment: C: How to calculate enrichment P-value?
8.2 years ago by biostart ▴ 370
5
votes
5
replies
7.4k
views
How to calculate enrichment P-value?
ChIP-Seq
updated 21 months ago by 43k • written 8.2 years ago by ▴ 370
2
votes
1
reply
5.4k
views
Comment: C: BedTools can't find "hg19.genome"
8.2 years ago by biostart ▴ 370
6
votes
3
replies
5.4k
views
BedTools can't find "hg19.genome"
ChIP-Seq
updated 8.2 years ago by 141k • written 8.2 years ago by ▴ 370
5
votes
19
replies
5.3k
views
Merging many BAM files [solved]
next-gen ChIP-Seq rna-seq
updated 21 months ago by 43k • written 8.2 years ago by ▴ 370
0
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0
replies
5.3k
views
Answer: A: Merging many BAM files [solved]
8.2 years ago by biostart ▴ 370
0
votes
0
replies
5.3k
views
Comment: C: Merging many BAM files [solved]
8.2 years ago by biostart ▴ 370
0
votes
1
reply
5.3k
views
Comment: C: Merging many BAM files
8.2 years ago by biostart ▴ 370
0
votes
1
reply
5.3k
views
Comment: C: Merging many BAM files
8.2 years ago by biostart ▴ 370
0
votes
1
reply
1.9k
views
Comment: C: Gene lengths: what does it measure?
8.2 years ago by biostart ▴ 370
0
votes
0
replies
1.3k
views
Comment: C: Queries related to homer
8.2 years ago by biostart ▴ 370
0
votes
2
replies
5.3k
views
Comment: C: Merging many BAM files
8.2 years ago by biostart ▴ 370
2
votes
1
reply
3.1k
views
Can I use HOMER to create a tag dir from a 400 Gb BAM file?
RNA-Seq ChIP-Seq
updated 8.2 years ago by 11k • written 8.2 years ago by ▴ 370
0
votes
0
replies
5.3k
views
Comment: C: Merging many BAM files
8.2 years ago by biostart ▴ 370
0
votes
1
reply
5.3k
views
Comment: C: Merging many BAM files
8.2 years ago by biostart ▴ 370
0
votes
1
reply
5.3k
views
Comment: C: Merging many BAM files
8.2 years ago by biostart ▴ 370
0
votes
3
replies
5.3k
views
Comment: C: Merging many BAM files
8.2 years ago by biostart ▴ 370
3
votes
9
replies
2.3k
views
SOLiD reads unreadable to Bowtie after unpacking from .sra archive [still open]
ChIP-Seq alignment
updated 2.0 years ago by 43k • written 8.3 years ago by ▴ 370
0
votes
2
replies
4.6k
views
Comment: C: Splice site coordinates: where to get them?
8.3 years ago by biostart ▴ 370
4
votes
4
replies
4.6k
views
Splice site coordinates: where to get them?
RNA-Seq ChIP-Seq sequence next-gen
updated 8.3 years ago by 26k • written 8.3 years ago by ▴ 370
104 results • Page 2 of 3
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