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cellchat analysis from from a Scanpy h5ad file
scanpy r h5ad CellChat cellchat
3 months ago by cgp09741 ▴ 10
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728
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Comment: Comment: Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
7 months ago by cgp09741 ▴ 10
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Comment: Comment: Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
updated 7 months ago by 43k • written 7 months ago by ▴ 10
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728
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Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
ATAC-seq multiomic signac
updated 7 months ago by 43k • written 7 months ago by ▴ 10
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Monocle2 Feature Plot
FeaturePlot Seurat Monocle
17 months ago by cgp09741 ▴ 10
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557
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Extract Monocle2 "State" for Seurat
FindMarkers Monocle Seurat DEG Monocle2
updated 17 months ago by ★ 1.6k • written 17 months ago by ▴ 10
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Identifying DEG's on Integrated samples
Seurat DEG
updated 19 months ago by ▴ 360 • written 19 months ago by ▴ 10
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1.7k
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Comment: Comment: DESeq2 dds Creation
20 months ago by cgp09741 ▴ 10
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1.7k
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Comment: Comment: DESeq2 dds Creation
21 months ago by cgp09741 ▴ 10
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1.7k
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DESeq2 dds Creation
deseq2
updated 20 months ago by 81k • written 21 months ago by ▴ 10
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Comment: Comment: How to transform the deg gene list from seurat to a gene list input to clusterPr
2.7 years ago by cgp09741 ▴ 10
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Comment: Comment: FindMarkers for ClusterProfiler
2.7 years ago by cgp09741 ▴ 10
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2.9k
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FindMarkers for ClusterProfiler
ClusterProfiler gseGO enrichGO
2.7 years ago by cgp09741 ▴ 10
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