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monocle 3-- Could not get node in small cluster
monocle3
updated 21 days ago by ★ 2.7k • written 10 months ago by ▴ 100
3
votes
4
replies
5.6k
views
Cellcyclescoring did not work in Seurat V5
Seurat single-cell
updated 4 months ago by 6.2k • written 16 months ago by ▴ 100
0
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0
replies
1.2k
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Comment: Comment: Problem with interpreting output from Monocle3 graph_test()
8 months ago by synat.keam ▴ 100
0
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1
reply
665
views
Comment: Comment: find DEG of monocle 3 object using tradeSeq
10 months ago by synat.keam ▴ 100
0
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3
replies
665
views
find DEG of monocle 3 object using tradeSeq
tradeSeq
updated 10 months ago by 45k • written 10 months ago by ▴ 100
0
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0
replies
426
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how to read graph_test output of monocle 3
monocle3
11 months ago by synat.keam ▴ 100
0
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0
replies
601
views
filter the most significant ligand and receptors in netVisual_bubble in cell chat
cellchat
11 months ago by synat.keam ▴ 100
0
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0
replies
695
views
Comment: Comment: Addmetadata to seurat obj
11 months ago by synat.keam ▴ 100
0
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0
replies
695
views
Comment: Comment: Addmetadata to seurat obj
11 months ago by synat.keam ▴ 100
2
votes
4
replies
695
views
Addmetadata to seurat obj
seurat
11 months ago by synat.keam ▴ 100
0
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1
reply
551
views
How plot multiple enrichment plot together
singlecell
updated 11 months ago by ★ 2.9k • written 11 months ago by ▴ 100
3
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2
replies
2.1k
views
Fail to install umap-learn in R
cellchat R
updated 11 months ago by 45k • written 13 months ago by ▴ 100
0
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0
replies
333
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Differentially expressed genes across condition
singlecell
12 months ago by synat.keam ▴ 100
0
votes
2
replies
2.1k
views
Filter out doublet and Clustering
single-cell
updated 12 months ago by ★ 1.8k • written 16 months ago by ▴ 100
0
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0
replies
2.1k
views
Answer: Answer: Fail to install umap-learn in R
13 months ago by synat.keam ▴ 100
0
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0
replies
509
views
Comment: Comment: Sample clustering from 10X single cell
13 months ago by synat.keam ▴ 100
2
votes
2
replies
509
views
Sample clustering from 10X single cell
clustering
13 months ago by synat.keam ▴ 100
0
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1
reply
1.2k
views
Comment: Comment: adjusting parameters in ViolinPlot did not work
13 months ago by synat.keam ▴ 100
8
votes
7
replies
1.2k
views
adjusting parameters in ViolinPlot did not work
single-cell
updated 13 months ago by 45k • written 13 months ago by ▴ 100
0
votes
0
replies
694
views
Seurat Figure legend
single cell
13 months ago by synat.keam ▴ 100
1
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0
replies
2.2k
views
Comment: Comment: How to remove center population from seurat cluster
15 months ago by synat.keam ▴ 100
0
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0
replies
2.2k
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Comment: Comment: How to remove center population from seurat cluster
15 months ago by synat.keam ▴ 100
0
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1
reply
2.2k
views
Comment: Comment: How to remove center population from seurat cluster
15 months ago by synat.keam ▴ 100
0
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0
replies
2.2k
views
Comment: Comment: How to remove center population from seurat cluster
15 months ago by synat.keam ▴ 100
14
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10
replies
2.2k
views
How to remove center population from seurat cluster
single-cell
15 months ago by synat.keam ▴ 100
0
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0
replies
1.2k
views
Comment: Comment: Rstudio cloud
15 months ago by synat.keam ▴ 100
5
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3
replies
1.2k
views
Rstudio cloud
R single-cell
15 months ago by synat.keam ▴ 100
0
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0
replies
2.4k
views
Comment: Comment: Should I scale all genes in single cell Seurat?
16 months ago by synat.keam ▴ 100
3
votes
2
replies
2.4k
views
Should I scale all genes in single cell Seurat?
singlecell
16 months ago by synat.keam ▴ 100
11
votes
6
replies
2.5k
views
6 follow
UMAP or TSNE for single cells?
single-cell
updated 16 months ago by ▴ 40 • written 16 months ago by ▴ 100
3
votes
2
replies
1.7k
views
Running for loop for resolution of Seurat got error: Error: Not an S4 object.
R single seurat cell
updated 16 months ago by 12k • written 16 months ago by ▴ 100
0
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0
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1.7k
views
Comment: Comment: running for loop for resolution of seurat got error: Error: Not an S4 object.
updated 16 months ago by 13k • written 16 months ago by ▴ 100
0
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1
reply
859
views
Comment: Comment: Reproducible seurat clustering
17 months ago by synat.keam ▴ 100
0
votes
3
replies
859
views
Reproducible seurat clustering
seurat clustering single-cell
updated 17 months ago by 45k • written 17 months ago by ▴ 100
4
votes
2
replies
1.4k
views
Annoate complex heatmap columns
complexheatmap
updated 17 months ago by 45k • written 17 months ago by ▴ 100
5
votes
6
replies
2.1k
views
Cluster annotation in single cell
Single-cell
updated 17 months ago by ▴ 250 • written 18 months ago by ▴ 100
0
votes
0
replies
677
views
DotPlot error in Seurat
Seurat single-cell
updated 17 months ago by 45k • written 17 months ago by ▴ 100
10
votes
2
replies
6.1k
views
Picking optimal resolution for single cell in seurat pipeline
single-cell
updated 17 months ago by 45k • written 17 months ago by ▴ 100
0
votes
0
replies
838
views
Comment: Comment: Feature plot not applicable for RunTSNE object in seurat?
18 months ago by synat.keam ▴ 100
3
votes
2
replies
838
views
Feature plot not applicable for RunTSNE object in seurat?
harmony Seurat single-cell
18 months ago by synat.keam ▴ 100
0
votes
0
replies
1.0k
views
Comment: Comment: comparision of umap single cell
18 months ago by synat.keam ▴ 100
1
vote
3
replies
1.0k
views
comparision of umap single cell
single-cell
18 months ago by synat.keam ▴ 100
0
votes
0
replies
1.2k
views
Comment: Comment: Generate a fraction of immune cell between two condition from single cell RNAseq
18 months ago by synat.keam ▴ 100
3
votes
4
replies
1.2k
views
Generate a fraction of immune cell between two condition from single cell RNAseq
single-cell
18 months ago by synat.keam ▴ 100
0
votes
0
replies
1.7k
views
Comment: Comment: differential gene expression analysis comparing different conditions using scRNA
18 months ago by synat.keam ▴ 100
3
votes
2
replies
648
views
Automatic Cluster Annotation to the subsets of immune cells
single-cell
updated 3 months ago by • 0 • written 18 months ago by ▴ 100
3
votes
1
reply
817
views
Overlapping cluster/annotation
Single-Cell
updated 18 months ago by 4.9k • written 18 months ago by ▴ 100
0
votes
1
reply
796
views
Drawing label around clusters
cells Single
updated 18 months ago by ★ 29k • written 18 months ago by ▴ 100
3
votes
2
replies
1.7k
views
Could not view/find meta.data and Error merging three seurat object
Seurat single-cell
updated 18 months ago by 45k • written 18 months ago by ▴ 100
0
votes
1
reply
2.1k
views
Comment: Comment: Cluster annotation in single cell
18 months ago by synat.keam ▴ 100
110 results • Page 1 of 3
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