User: jamieson.pierce

Reputation:
30
Status:
New User
Location:
Last seen:
1 year, 9 months ago
Joined:
5 years, 7 months ago
Email:
j**************@gmail.com

about me

Posts by jamieson.pierce

<prev • 2 results • page 1 of 1 • next >
0
votes
1
answer
1.5k
views
1
answers
Comment: C: Bowtie2/HISAT using single-end to generate FPKM???
... My PIs contracted both seq and bioinf. Yes in the documentation they removed adapters and quality trimmed. (Not sure what software was used) How would this create SE and PE files? I also checked 10,000 reads in the fastQ and found them all named with the same convention. No F or RF or FR or /1 or / ...
written 2.2 years ago by jamieson.pierce30
9
votes
1
answer
1.5k
views
10 follow
1
answer
Bowtie2/HISAT using single-end to generate FPKM???
... Hi all, I am familiar with the fact that paired-end reads are used to generate FPKM, and single-end reads are used to make RPKM. I recently received a sample report from a third party RNA-seq service which provided me with FPKM normalized read counts for each transcript and sample in spreadsheet. ...
bowtie2 fpkm hisat rna-seq rpkm written 2.2 years ago by jamieson.pierce30 • updated 2.2 years ago by Brian Bushnell16k

Latest awards to jamieson.pierce

Popular Question 5.6 years ago, created a question with more than 1,000 views. For Analyzing A Genome?

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 619 users visited in the last hour