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Comment: Comment: getting RPKM and VST using DEseq2 package
20 months ago by andrew.j.skelton73 6.5k
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898
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Comment: Comment: How to resolve this Error in checkFullRank(modelMatrix) in DESeq2 ?
2.1 years ago by andrew.j.skelton73 6.5k
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1
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898
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Comment: Comment: How to resolve this Error in checkFullRank(modelMatrix) in DESeq2 ?
2.1 years ago by andrew.j.skelton73 6.5k
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1
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2.2k
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Comment: Comment: Transcripts mapping using Salmon
2.6 years ago by andrew.j.skelton73 6.5k
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1
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2.2k
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Comment: Comment: Transcripts mapping using Salmon
2.6 years ago by andrew.j.skelton73 6.5k
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1
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2.2k
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Comment: C: Command not found after pip install spliceai
3.5 years ago by andrew.j.skelton73 6.5k
1
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0
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6.1k
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Comment: C: Time Course RNA-Seq
3.7 years ago by andrew.j.skelton73 6.5k
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0
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1.5k
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Comment: C: Keep the paired reads whose length less than 400,000 bp
4.0 years ago by andrew.j.skelton73 6.5k
0
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1
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2.3k
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Comment: C: Student's t-test (For Paired samples) calculation
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
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0
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3.4k
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Comment: C: RNA-seq dedupe PCR contamination before or after mapping
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
3
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1
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10k
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Comment: C: Bimodal GC content
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
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0
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2.7k
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Comment: C: Help needed with selecting top DE genes, Microarray data analysed with "limma"
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
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0
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1.4k
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Comment: C: What tool to choose to compare 350 VCF files from the whole genome data processi
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
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2
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5.0k
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Comment: C: alignment rate in bowtie2
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
1
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1
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5.0k
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Comment: C: alignment rate in bowtie2
updated 4.3 years ago by 43k • written 8.2 years ago by 6.5k
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1
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4.3k
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Comment: C: Determine differential expression for microarray data; sample size = 2 + many te
updated 4.3 years ago by 43k • written 10.0 years ago by 6.5k
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1
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3.5k
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Comment: C: Illumina Microarray Annotation
updated 4.3 years ago by 43k • written 10.0 years ago by 6.5k
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0
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4.0k
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Comment: C: Statistical tests for sanity check of expression data before inferring network
updated 4.3 years ago by 43k • written 10.0 years ago by 6.5k
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1
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6.3k
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Comment: C: After run Cufflinks - cuffdiff there is no information about isoforms, TSS, CDS.
updated 4.3 years ago by 43k • written 10.0 years ago by 6.5k
1
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1
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4.0k
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Comment: C: Statistical tests for sanity check of expression data before inferring network
updated 4.3 years ago by 43k • written 10.0 years ago by 6.5k
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0
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3.6k
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Comment: C: Using ensembl genomes and gtf conversion
updated 4.3 years ago by 43k • written 8.3 years ago by 6.5k
1
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1
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4.0k
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Comment: C: Statistical tests for sanity check of expression data before inferring network
updated 4.3 years ago by 43k • written 10.0 years ago by 6.5k
0
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0
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8.0k
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Comment: C: Chrom Sizes for Ensembl Reference
updated 4.3 years ago by 43k • written 10.0 years ago by 6.5k
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1
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8.0k
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Comment: C: Chrom Sizes for Ensembl Reference
updated 4.3 years ago by 43k • written 10.0 years ago by 6.5k
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1
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2.6k
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Comment: C: Ilumina Genome Studio: How to extract control_probe_profile?
updated 4.3 years ago by 43k • written 8.3 years ago by 6.5k
0
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0
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5.0k
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Comment: C: R LIMMA Longitudinal analysis adjusting for continuous variables
updated 4.3 years ago by 43k • written 8.3 years ago by 6.5k
2
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0
replies
1.9k
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Comment: C: How to use Ruby BioSamtools for SNP finding on .bam and .sam files?
updated 4.4 years ago by 43k • written 8.3 years ago by 6.5k
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1
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1.7k
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Comment: C: UCSC browser gives two sets of exons for a Refseq ID (f and r) - SNP interpretat
updated 4.4 years ago by 43k • written 8.3 years ago by 6.5k
0
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1
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2.3k
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Comment: C: Illumina no longer services instruments purchased through third parties
updated 4.4 years ago by 43k • written 8.3 years ago by 6.5k
1
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1
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2.5k
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Comment: C: error in cuffmerge
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
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0
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2.5k
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Comment: C: Cell Line gene expression Analysis with multiple replicates
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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0
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1.8k
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Comment: C: cant find a relevant mirna predictor
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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1
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2.9k
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Comment: C: Complex design with limma R package
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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1
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2.9k
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Comment: C: Complex design with limma R package
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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0
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2.8k
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Comment: C: What is the reason for deviation from diagonal?
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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0
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1.8k
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Comment: C: True meaning of the full_read_support flag in cufflinks output
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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0
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1.8k
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Comment: C: cant find a relevant mirna predictor
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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0
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2.3k
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Comment: C: Microarray Multimapping probesets
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
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0
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3.0k
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Comment: C: RNA Seq on multiple samples
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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0
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7.5k
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Comment: C: cufflinks vs cuffquant
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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1
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7.5k
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Comment: C: cufflinks vs cuffquant
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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0
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1.3k
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Comment: C: Help with using gsub function in R
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
1
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0
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2.6k
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Comment: C: How to Design Exome Sequencing study?
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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0
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8.7k
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Comment: C: What is pooled samples in NGS?
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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1
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2.6k
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Comment: C: How to Design Exome Sequencing study?
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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1
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8.7k
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Comment: C: What is pooled samples in NGS?
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
1
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0
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8.7k
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Comment: C: What is pooled samples in NGS?
updated 4.4 years ago by 43k • written 8.4 years ago by 6.5k
0
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1
reply
4.1k
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Comment: C: Salmon warning detected suspicious pair
updated 4.4 years ago by 43k • written 8.5 years ago by 6.5k
2
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0
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3.4k
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Comment: C: bioinformatics command line
updated 4.4 years ago by 43k • written 8.5 years ago by 6.5k
0
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0
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1.3k
views
Comment: C: Question about VariationHunter!
updated 4.4 years ago by 43k • written 8.5 years ago by 6.5k
392 results • Page 1 of 8
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