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questions
1
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6
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1.9k
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Fastest way to merge 2 vcfs and get a bcf
bcftols
written 3.0 years ago by
boxate1618
▴ 60
0
votes
0
replies
519
views
Is local ancestry inference usually run with a sequenced reference panel?
rfmix
ancestry
3.0 years ago by
boxate1618
▴ 60
3
votes
9
replies
2.3k
views
if you annotate a vcf with snpeff, how do you know if the annotation are referring to the alternate or reference allele?
annotation
snpsift
snpeff
vep
updated 3.0 years ago by
Emily
23k • written 3.0 years ago by
boxate1618
▴ 60
0
votes
0
replies
768
views
snpEff gives warning: INFO_REALIGN_3_PRIME, what does it mean?
annotation
vep
snpeff
3.0 years ago by
boxate1618
▴ 60
0
votes
3
replies
882
views
Jointly calling samples from different studies, which have different read lengths?
joint
variant
gatk
calling
updated 3.0 years ago by
heskett
▴ 110 • written 3.0 years ago by
boxate1618
▴ 60
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