updated 13 hours ago by
analyst
▴
50
•
written 6.4 years ago by
David_emir
▴
490
9
votes
13
replies
4.8k
views
1
vote
7
replies
475
views
updated 19 hours ago by
Pierre Lindenbaum
161k
•
written 3 days ago by
schmince
•
0
1
vote
4
replies
473
views
1
vote
4
replies
379
views
updated 11 hours ago by
GenoMax
142k
•
written 23 days ago by
aniigodwinn
•
0
1
vote
9
replies
339
views
updated 18 hours ago by
i.sudbery
19k
•
written 3 days ago by
Assa Yeroslaviz
★
1.8k
3
votes
5
replies
331
views
0
votes
10
replies
291
views
1
vote
4
replies
271
views
10 hours ago by
rackbersingh
•
0
0
votes
2
replies
249
views
3
votes
4
replies
230
views
0
votes
3
replies
205
views
updated 21 hours ago by
manaswwm
▴
510
•
written 3 days ago by
Researcher
▴
30
0
votes
5
replies
185
views
15 hours ago by
SilhouetteQ
•
0
0
votes
2
replies
159
views
updated 10 hours ago by
Ram
43k
•
written 1 day ago by
sainavyav22
•
0
1
vote
3
replies
158
views
updated 10 hours ago by
Ram
43k
•
written 17 hours ago by
Omics data mining
▴
260
0
votes
1
reply
127
views
0
votes
1
reply
117
views
3
votes
3
replies
118
views
1
vote
3
replies
113
views
3
votes
1
reply
110
views
0
votes
0
replies
110
views
0
votes
1
reply
107
views
updated 10 hours ago by
Ram
43k
•
written 20 hours ago by
carolofharvest
▴
40
0
votes
1
reply
106
views
0
votes
1
reply
92
views
0
votes
0
replies
88
views
0
votes
1
reply
86
views
updated 19 hours ago by
GenoMax
142k
•
written 19 hours ago by
maria.soler
•
0
0
votes
1
reply
84
views
updated 10 hours ago by
Ram
43k
•
written 10 hours ago by
rackbersingh
•
0
0
votes
1
reply
74
views
updated 7 hours ago by
Pierre Lindenbaum
161k
•
written 8 hours ago by
ajbarrett98
•
0
0
votes
0
replies
68
views
updated 22 hours ago by
zx8754
11k
•
written 1 day ago by
Lambodarswain316
•
0
0
votes
0
replies
64
views
updated 10 hours ago by
Ram
43k
•
written 16 hours ago by
naomiboldon
•
0
0
votes
0
replies
60
views
13 hours ago by
beantkapoor16
•
0
0
votes
0
replies
39
views
4 hours ago by
Christopher
•
0
Recent Votes
Recent Locations •
All
India, 5 minutes ago
India, 5 minutes ago
UCLA, 6 minutes ago
Pakistan, 9 minutes ago
Malaysia, 11 minutes ago
United States, 11 minutes ago
Singapore, 13 minutes ago
Recent Awards •
All
Popular Question to
melissachua90
▴
70
Popular Question to
octpus616
▴
100
Popular Question to
turcoa1
•
0
Scholar to
chrchang523
10k
Popular Question to
Lélé
•
0
Commentator to
dthorbur
★
1.9k
Popular Question to
maria.soler
•
0
Recent Replies
Answer: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
Pierre Lindenbaum
161k
use bcftools merge with --force-samples and then use jvarkit https://jvarkit.readthedocs.io/en/latest/VcfFilterJdk/ to replace the no-call …
Answer: In IGV is this a heterogeneous mutation or false call?
by
swbarnes2
14k
Since all the reads that show the alternate allele have to be clipped to align there, I'd say those reads are misaligned. I would say that…
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
GenoMax
142k
> Here's a few lines from the head of the raw fastq
If your files are actually compressed (as their names suggest) then you should not be …
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
GenoMax
142k
If you added the `\` before the `+` then there is no need for it. It makes it appear that the sequences are not in proper fastq format. Ple…
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
Mensur Dlakic
★
27k
This seems to be the same unanswered question as before, except that its description is split over two threads. You are now forcing us to r…
Answer: what is another word for a BLAST "hit"?
by
dec986
▴
380
I'll probably go with "matches" even though it doesn't sound as good as just "hit"
Comment: what is another word for a BLAST "hit"?
by
Pierre Lindenbaum
161k
> is there a synonym for hits from BLAST?
alignment
Comment: How are score_weights calculated in this code?
by
Ram
43k
Is this ALL the context you can give us?
Comment: Genome Assembly task + Protein Translation, assignment advice on a question
by
Ram
43k
Where did you copy-paste this from? It looks like an assignment question.
Comment: Contig assembly task, errors
by
rackbersingh
•
0
Hi Phillip,
Thanks for sharing you knowledge and funnily enough this really was an amplitude test, but anyways your sharing of knowledge h…
Comment: Can I readmap short reads to rDNA references?
by
GenoMax
142k
If these are short reads and the organisms are related then you are going to have a difficult time classifying the reads.
Comment: extract viral protein of interest from 10k whole viral genomes
by
GenoMax
142k
With a large dataset it is always best to do the search locally (or in the cloud, if you don't have necessary hardware available locally).
Comment: Truncated metadata file report from ENA Portal API
by
Giulia
•
0
Thank you so much for your hint! I'll look into this!
Comment: How to convert Haps file to vcf file?
by
curious
▴
750
unzip haps then:
bin/shapeit \
-convert \
--input-haps {haps_prefix} \
--thread {cpus} \
--output-…
Traffic: 1464 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6