Entering edit mode
8 months ago
pt.taklifi
▴
60
So I have several fastq files of a BS-seq assay and most of them are corrupted, some reads either don't have a header or the third line (the line with + ), since the files are quiet large, I don't think I could recover them with typical commands in linux. So I was wondering if there is a tool that removes only the corrupted reads.
Thanks in advance