Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : all time
all time
today
this week
this month
this year
1,000 results • Page
2 of 20
Sort: Votes
Rank
Views
Votes
Replies
70
votes
19
replies
5.6k
views
13 follow
Forum:
Thrown Into A Bioinformatics Position
computational-analysis
updated 22 months ago by
Ram
43k • written 8.6 years ago by
System
▴ 170
69
votes
39
replies
4.7k
views
14 follow
Forum:
Preparation for Bioinformatics.SE closing
meta
biostars
updated 12 months ago by
Ram
43k • written 7.0 years ago by
John
13k
68
votes
48
replies
8.9k
views
16 follow
Forum:
Stranger Things: unexpected limitations of popular tools
samtools
hisat2
updated 12 months ago by
Ram
43k • written 6.8 years ago by
Istvan Albert
100k
68
votes
22
replies
8.0k
views
16 follow
Forum:
Learning Python: list of resources
python
updated 13 months ago by
Ram
43k • written 7.6 years ago by
dago
★ 2.8k
67
votes
21
replies
6.1k
views
8 follow
Forum:
Meta: Markdown in Biostars (now enabled)
meta
14 months ago by
Ram
43k
67
votes
40
replies
9.7k
views
12 follow
Forum:
I want to re-open the old debate: python or perl ?
perl
python
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
Gabriel R.
★ 2.9k
66
votes
21
replies
6.9k
views
18 follow
Forum:
Is there anyone who was a pure biologist?
next-gen
updated 14 months ago by
Ram
43k • written 10.1 years ago by
Chong Tang
▴ 100
66
votes
29
replies
16k
views
15 follow
Forum:
Fundamentals Of Designing Biological Databases?
database
updated 15 months ago by
Ram
43k • written 13.5 years ago by
anon1234z
▴ 130
65
votes
27
replies
7.5k
views
14 follow
Forum:
What is the reason for most software errors in Bioinformatics according to you?
software-error
blast
sequencing
SNP
R
updated 13 months ago by
Ram
43k • written 8.2 years ago by
harne.priyanka
▴ 110
65
votes
57
replies
8.5k
views
12 follow
Forum:
Bioinformatics Mobile App
android
genome
iphone
mutations
updated 2.3 years ago by
Ram
43k • written 9.5 years ago by
aeinsights
▴ 20
65
votes
26
replies
19k
views
13 follow
Forum:
Macosx For Bioinformatics?
linux
updated 14 months ago by
Ram
43k • written 10.5 years ago by
Eric Normandeau
11k
64
votes
24
replies
3.1k
views
12 follow
Forum:
How much I must feel useless?
machine-learning
Programming
statistics
updated 11 months ago by
Ram
43k • written 5.6 years ago by
Molecular_genetics
▴ 80
64
votes
8
replies
8.3k
views
7 follow
Forum:
Isaac Asimov Accurately Predicts Woes Of Bioinformatician
bioinformatician
updated 14 months ago by
Ram
43k • written 11.0 years ago by
Obi Griffith
20k
63
votes
28
replies
4.1k
views
11 follow
Forum:
Bioinformatics analyses & errors: need for better post-publication tools?
next-gen
RNA-Seq
updated 13 months ago by
Ram
43k • written 8.0 years ago by
ablanchetcohen
★ 1.2k
63
votes
9
replies
3.9k
views
Forum:
Should The "Post Closing" Option Exist? Vote Now!
meta
updated 14 months ago by
Ram
43k • written 11.0 years ago by
Istvan Albert
100k
63
votes
11
replies
16k
views
9 follow
Forum:
Web Based Interactive Resources To Learn Programming And/Or Bioinformatics
programming
updated 14 months ago by
Ram
43k • written 10.9 years ago by
Malachi Griffith
20k
61
votes
16
replies
8.2k
views
14 follow
Forum:
Rust or C++, what to learn after Go for high-performance bioinformatics tools?
library
updated 16 months ago by
Samuel Lampa
★ 1.3k • written 3.6 years ago by
shenwei356
8.5k
61
votes
70
replies
14k
views
21 follow
Forum:
Biostar 2.0 released
meta
biostars
updated 15 months ago by
Ram
43k • written 10.1 years ago by
Istvan Albert
100k
60
votes
25
replies
5.8k
views
8 follow
Forum:
Am I crazy, or are most published RNA-seq studies vastly underpowered?
sample-size
statistical-power
RNA-Seq
updated 11 months ago by
Ram
43k • written 3.8 years ago by
telroyjatter
▴ 230
60
votes
28
replies
8.3k
views
27 follow
Forum:
Jim Robinson of the Integrative Genomics Viewer (IGV) uses this
uses-this
updated 14 months ago by
Ram
43k • written 9.6 years ago by
Istvan Albert
100k
60
votes
14
replies
12k
views
16 follow
Forum:
Interesting bioinformatics blogs (2017 edition)
blogs
updated 14 months ago by
Ram
43k • written 7.2 years ago by
WouterDeCoster
47k
57
votes
15
replies
6.3k
views
9 follow
Forum:
Good practices while dealing with very large datasets
Big-Data
Programming
updated 12 months ago by
Ram
43k • written 7.0 years ago by
VHahaut
★ 1.2k
57
votes
43
replies
16k
views
8 follow
Forum:
Best RNA-Seq aligner: A comparison of mapping tools
NGS
alignment
genome
RNA-Seq
sequence
updated 14 months ago by
Ram
43k • written 5.3 years ago by
David Langenberger
11k
57
votes
19
replies
28k
views
6 follow
Forum:
Attention: Bowtie2 And Multiple Hits
next-gen
bowtie
mapping
updated 15 months ago by
Ram
43k • written 11.6 years ago by
David Langenberger
11k
57
votes
42
replies
6.7k
views
12 follow
Forum:
Why is academic software hard to install?
software-installation
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
lh3
33k
57
votes
15
replies
4.8k
views
9 follow
Forum:
Entice Biologists To Learn R
r
updated 15 months ago by
Ram
43k • written 12.6 years ago by
Madelaine Gogol
5.3k
57
votes
9
replies
5.7k
views
14 follow
Forum:
Handbooks for Bioinformatics Ninjas
gallery
updated 13 months ago by
Ram
43k • written 8.0 years ago by
Shicheng Guo
★ 9.4k
56
votes
19
replies
4.1k
views
9 follow
Forum:
How to apply for a job
resume
cover-letter
application
CV
updated 12 months ago by
Ram
43k • written 6.8 years ago by
Emily
23k
55
votes
16
replies
6.0k
views
8 follow
Forum:
Mission Impossible: you have 1 minute to analyze the Ebola Genome
ebola
mission-impossible
updated 20 months ago by
Ram
43k • written 9.5 years ago by
Istvan Albert
100k
54
votes
34
replies
5.0k
views
13 follow
Forum:
Should We Release Database Dumps Of All Questions On Biostar?
meta
biostars
updated 15 months ago by
Ram
43k • written 13.5 years ago by
Istvan Albert
100k
54
votes
16
replies
5.7k
views
13 follow
Forum:
The new era of bioinformatics: simple and fast tools, fewer and more informative data
kallisto
computational-cost
updated 15 months ago by
Ram
43k • written 9.0 years ago by
Istvan Albert
100k
52
votes
18
replies
6.4k
views
14 follow
Forum:
Do You Feel Good Or Bad About Putting Your Photo At Biostar?
meta
biostars
updated 15 months ago by
Ram
43k • written 10.7 years ago by
ugly.betty77
★ 1.1k
52
votes
8
replies
4.8k
views
8 follow
Forum:
What Is The Proper Way To Think About Reinventing The Wheel As A Bioinformatician?
software-development
updated 15 months ago by
Ram
43k • written 11.3 years ago by
KCC
★ 4.1k
51
votes
24
replies
9.2k
views
7 follow
Forum:
Bio-informatics salary distribution versus Java salary distribution in the UK
career
updated 2.4 years ago by
Ram
43k • written 9.8 years ago by
William
★ 5.3k
51
votes
16
replies
5.9k
views
11 follow
Forum:
What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2011?
papers
updated 15 months ago by
Ram
43k • written 12.4 years ago by
Farhat
★ 2.9k
50
votes
8
replies
9.6k
views
6 follow
Forum:
Encode Commentary From Dan Graur
encode
updated 15 months ago by
Ram
43k • written 11.2 years ago by
Damian Kao
16k
50
votes
20
replies
6.1k
views
18 follow
Forum:
Explain bioinformatics to a 10 year old
bioinformatics
updated 14 months ago by
Ram
43k • written 8.2 years ago by
novice
★ 1.1k
50
votes
19
replies
5.0k
views
7 follow
Forum:
Proposal: Biostar Wants To Run Your Ads. Feedback Requested.
biostars
updated 15 months ago by
Ram
43k • written 11.2 years ago by
Istvan Albert
100k
50
votes
4
replies
9.4k
views
Forum:
How to add images to a Biostars post
how-to
15 months ago by
Ram
43k
49
votes
27
replies
7.4k
views
10 follow
Forum:
Possible augmented reality tools for bioinformatics and current problems
visualization
3D
augmented-reality
updated 13 months ago by
Ram
43k • written 8.6 years ago by
Peter Leontev
▴ 90
49
votes
36
replies
8.7k
views
11 follow
Forum:
New features and bug fixes for Biostar to work on during Google Summer of Code
meta
biostars
gsoc
updated 15 months ago by
Ram
43k • written 10.0 years ago by
Paolo
▴ 110
49
votes
20
replies
2.1k
views
10 follow
Forum:
First experiences matter
first-time
tolerance
updated 4 months ago by
Michael Love
★ 2.6k • written 4 months ago by
Mensur Dlakic
★ 27k
49
votes
19
replies
7.3k
views
13 follow
Forum:
Why Are There No Proteomics Questions In Biostar?
proteomics
biostars
updated 15 months ago by
Ram
43k • written 13.5 years ago by
Jdnavarro
▴ 410
48
votes
38
replies
17k
views
8 follow
Forum:
Eukaryotic Genome Annotation in 2016
software
genome
annotation
updated 13 months ago by
Ram
43k • written 8.2 years ago by
Eric Normandeau
11k
47
votes
37
replies
8.8k
views
12 follow
Forum:
The Organisation Of Really Contrived Acronyms (Orca)
acronyms
updated 14 months ago by
Ram
43k • written 10.7 years ago by
Niallhaslam
2.3k
47
votes
30
replies
4.4k
views
10 follow
Forum:
Bioinformatics software distribution
software
updated 12 months ago by
Ram
43k • written 7.2 years ago by
Petr Ponomarenko
★ 2.8k
47
votes
7
replies
3.9k
views
7 follow
Forum:
Would There Be Interest In A 'Next-Gen Sequencing' Stackexchange Site?
meta
next-gen
updated 15 months ago by
Ram
43k • written 11.5 years ago by
14134125465346445
★ 3.6k
47
votes
24
replies
6.6k
views
15 follow
Forum:
What's fascinating about Bioinformatics for potential students?
career
msc
updated 17 months ago by
Ram
43k • written 6.6 years ago by
Michael
54k
47
votes
19
replies
14k
views
10 follow
Forum:
Is Software Development a key part of Bioinformatics?
Software-Development
updated 21 months ago by
Ram
43k • written 9.4 years ago by
xinuke
▴ 70
47
votes
11
replies
4.2k
views
Forum:
What Operating System Are You Using For Bioinformatic Work?
linux
windows
updated 14 months ago by
Ram
43k • written 10.5 years ago by
Eric Normandeau
11k
1,000 results • Page
2 of 20
Recent Votes
A: How is the design in DESeq2 work?
Error in CIBERSORTx ($ operator is invalid for atomic vectors)
Answer: RNAseq coverage vs depth for transcript isoform expression?
constructing pangenome through psvcp
Differential Expression with limma: Contrast and Design Matrix, combinatorial approach valid?
Differential Expression with limma: Contrast and Design Matrix, combinatorial approach valid?
Answer: RNAseq coverage vs depth for transcript isoform expression?
Recent Locations •
All
Brazil,
1 minute ago
United States,
2 minutes ago
Japan,
7 minutes ago
United States,
15 minutes ago
United States,
43 minutes ago
Australia,
59 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087,
1 hour ago
Recent Awards •
All
Popular Question
to
synat.keam
▴ 100
Scholar
to
jv
★ 1.8k
Popular Question
to
syedahamdani94
• 0
Popular Question
to
mohammadhassanj
▴ 260
Scholar
to
dsull
★ 6.0k
Popular Question
to
finswimmer
16k
Popular Question
to
Ezequiel
• 0
Recent Replies
Comment: Error in CIBERSORTx ($ operator is invalid for atomic vectors)
by
nguyenn6
• 0
did you ever figure it out? i'm having the same issue.
Comment: Traveler with Infernal mapping failed
by
anton.i.petrov
• 0
Hi Larissa! I am the lead developer of R2DT and I've just noticed this question. Could you please email help@r2dt.bio with your input seque…
Comment: constructing pangenome through psvcp
by
analyst
▴ 50
Fixed the issue by updating nucmer version.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
GenoMax
142k
Can you create a small test database (`makeblastdb`) from your query file and try to run the search against the same file and see if that w…
Comment: calculating genomic coverage/ base overlap in R
by
1769mkc
★ 1.2k
you can `dput(head(df)` for the both the data frame so that other can test for possible solutions
Comment: Broad and Narrow peaks
by
ATpoint
82k
What is your question? It's unclear.
Comment: Help with Biopython for Beginner
by
Joe
21k
One question before offering more solutions: are you trying to learn Python with this as an example problem, or are you trying to find the …
Answer: RNAseq coverage vs depth for transcript isoform expression?
by
Gordon Smyth
★ 7.2k
See the exploration of isoform estimation precision vs read length and sequencing depth in our paper: https://doi.org/10.1093/nar/gkad1167.…
Comment: How to handle duplicated genes in TCGA data?
by
txema.heredia
▴ 130
Why does the tool require gene symbols and not ensembl ids? Is it retrieving information from somewhere else? If so, your best bet is to fi…
Comment: how to treat the replicates while performing WGCNA
by
mavy
▴ 10
Thank you so much for your response . Really appreciate it. I will try the way you mentioned and will get back if I have any query
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
hophuquy0944
• 0
i have the same error, i used high performance computer, here is my code to set memory. srun --nodes=1 --ntasks=1 --cpus-per-task=24 -…
Comment: Overlapping Ranges within Granges object
by
Alex Reynolds
35k
Yes, `bedmap` will perform operations on one or two BED files.
Comment: B allele frequency (BAF)
by
aidangcruickshank
▴ 10
Apologies for resurrecting this post, but any idea what that functions "regions" paramater takes? Would it be a GRanges object? The documen…
Comment: How to handle duplicated genes in TCGA data?
by
Ngrin
• 0
Thanks @txema.heredia.The tool I am going to use only accepts gene symbols. This is the reason. So I cannot use ENS IDs.
Answer: Design for complex RNA-Seq experiment using Deseq2
by
swbarnes2
14k
This is a rather small experiment, I don't know that you can establish a meaningful baseline for each patient with a single pre sample, and…
Traffic: 1390 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6