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News: The Biostar Handbook. A bioinformatics e-book for beginners.
training handbook
updated 3 months ago by 2.8k • written 7.5 years ago by 100k
1
vote
0
replies
64
views
News: ICGEB - SLIBTEC NGS Workshop: Won Best Oral Presentation Award
BestTalk PlatformPresentation
11 hours ago by Dr. • 0
1
vote
0
replies
167
views
News: Course on Manual Genome Curation
Genome-Assembly Pretext-View Manual-Genome-Curation
updated 3 days ago by 43k • written 3 days ago by ★ 2.5k
0
votes
0
replies
88
views
News: New course: Manipulation of NGS Data for Genomic and Population Genetics Analyses
KeepLearning TScourses
5 days ago by Transmitting Science communication ▴ 70
0
votes
2
replies
442
views
News: FINAL CALL: 8th Berlin Summer School in NGS Data Analysis - Only a few last places available
DNA-seq variant-calling RNA-seq illumina transcriptomics
6 days ago by David Langenberger 11k
0
votes
0
replies
130
views
News: Online course: An Introduction to Nanopore Direct RNA Sequencing
Nanopore RNAseq
8 days ago by carlopecoraro2 ★ 2.5k
2
votes
0
replies
160
views
News: course on Landscape Genomics at the EPFL in Lausanne (June 17-21)
LandscapeGenomics SNPs LocalAdaptation GIS
10 days ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
133
views
News: Online course: Introduction to Deep Learning
Python Deep-Learning Convolutional-Neural-Network Machine-Learning
updated 11 days ago by 43k • written 11 days ago by ★ 2.5k
0
votes
0
replies
125
views
News: Online course. -Time series analysis and Forecasting in R
Time-Series Forecasting R Stastics
12 days ago by carlopecoraro2 ★ 2.5k
1
vote
2
replies
296
views
News: We created a Bioinformatics Competition for Spatial Transcriptomics: MICOS-EU
cell-clustering Spatial-transcriptomics
updated 13 days ago by • 0 • written 14 days ago by ▴ 10
0
votes
0
replies
128
views
News: Online course: Bioinformatic analysis of transposable elements
GenomeAssembly Transcriptomics TransposableElements ManualCuration
14 days ago by carlopecoraro2 ★ 2.5k
1
vote
2
replies
1.2k
views
News: The GDC Legacy Archive is retiring soon.
genomic-data-commons tcga gdc
15 days ago by Zhenyu Zhang ★ 1.2k
0
votes
0
replies
150
views
News: Cellosaurus release 49 is available
cell biocuration line database news knowledgebase
17 days ago by Amos Bairoch ▴ 120
0
votes
0
replies
126
views
News: Beyond beginner R: Advancing your coding skills - September 16-19
Advanced-Coding Programming R
updated 17 days ago by 43k • written 18 days ago by ★ 2.5k
0
votes
0
replies
187
views
News: Goodbye, Slow Code? How BioNumpy can Redefine Python’s Role in Bioinformatics!
BioNumPy Python NumPy
updated 19 days ago by 43k • written 19 days ago by • 0
0
votes
0
replies
153
views
News: Online course: Meta-analysis in R - last 2 seats left
Meta-Analysis Statistics R
updated 19 days ago by 43k • written 19 days ago by ★ 2.5k
0
votes
0
replies
140
views
News: Online course: Genome Annotation
Genome-Assembly Genome-Annotation
21 days ago by carlopecoraro2 ★ 2.5k
3
votes
0
replies
244
views
News: Webinar “Learning Single-cell Atlases” with Dr. Fabian Theis, author of Scanpy on May 8
Scanpy Generative-AI scRNA Machine-Learning
updated 23 days ago by 43k • written 24 days ago by ▴ 60
0
votes
0
replies
188
views
News: Master Meta-analysis with R (May 13-16) - Online!
Meta-Analysis Statistics R
updated 24 days ago by 43k • written 24 days ago by ★ 2.5k
0
votes
0
replies
150
views
News: hands-on introduction to generalized linear models (GLMs) using R
Generalized-Linear-Models GLM R
updated 25 days ago by 43k • written 26 days ago by ★ 2.5k
3
votes
0
replies
161
views
News: Interested in Spatial Omics?
Bioconductor Spatial-Omics Spatial-Transcriptomics
updated 26 days ago by 43k • written 26 days ago by ★ 2.5k
0
votes
0
replies
128
views
News: Online course: DNA methylation
Pacbio Nanopore DnaMethylation Evolution
28 days ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
166
views
News: upcoming online statistical courses
Statistics R Data-Analysis
updated 28 days ago by 43k • written 29 days ago by ★ 2.5k
0
votes
0
replies
227
views
News: Online course: Meta-analysis in R
Meta-Analysis Statistics R
updated 4 weeks ago by 43k • written 4 weeks ago by ★ 2.5k
0
votes
0
replies
208
views
News: Course - Agent-Based Modelling Using NetLogo - University of Lodz, Poland
Netlogo Individual-Based-Models Agent-Based-Models
updated 4 weeks ago by 43k • written 4 weeks ago by ★ 2.5k
0
votes
0
replies
213
views
News: Final Call - Bioinformatics Pipeline Development with Nextflow (May 27-29, 2024)
workshop RNA-seq nextflow DNA-seq
updated 4 weeks ago by 43k • written 4 weeks ago by 11k
0
votes
0
replies
176
views
News: Deadline Approaching: PETs for Public Health Challenge
privacy public-health-challenge
updated 4 weeks ago by 43k • written 4 weeks ago by ▴ 380
0
votes
0
replies
206
views
News: Online course: Network Analysis in R
NetworkAnalyis R
5 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
214
views
News: Online course: Meta-analysis in R
Meta-Analysis R
updated 5 weeks ago by 43k • written 5 weeks ago by ★ 2.5k
1
vote
0
replies
157
views
News: Online Live Course: Introduction to Machine Learning in R
Rstats TScourses Rlang Rproject
updated 5 weeks ago by 43k • written 5 weeks ago by ▴ 70
2
votes
0
replies
152
views
News: Online Course Generalised Additive Mixed Models (GAMM): modelling space-time correlation structures
GAMM Rlang Rstats Rproject
updated 5 weeks ago by 43k • written 5 weeks ago by ▴ 70
2
votes
0
replies
153
views
News: Online Course Introduction to Network Analysis and Modelling
Python Network-Analysis
updated 5 weeks ago by 43k • written 5 weeks ago by ▴ 70
2
votes
0
replies
141
views
News: Course Functional Programming with R
Rstats TScourses Rproject KeepLearning Rlang
5 weeks ago by Transmitting Science communication ▴ 70
12
votes
2
replies
519
views
News: 8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop RNA-Seq DNA-Seq Illumina
5 weeks ago by David Langenberger 11k
2
votes
0
replies
151
views
News: Online course: Genome Annotation
Genome-Assembly RNA-seq Genome-Annotation
updated 5 weeks ago by 43k • written 5 weeks ago by ★ 2.5k
0
votes
0
replies
147
views
News: Online course: Multivariate Data Analysis with R and vegan
Multivariate-Statistics vegan R
updated 5 weeks ago by 43k • written 6 weeks ago by ★ 2.5k
1
vote
0
replies
202
views
News: Landscape Genomics course in Switzerland
LFMM Landscape-Genomics Sambada R Local-Adaptation
18 days ago by carlopecoraro2 ★ 2.5k
8
votes
2
replies
853
views
News: FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell sequencing
6 weeks ago by David Langenberger 11k
0
votes
0
replies
177
views
News: Online course: Food Traceability Using Genomic Tools
Nanopore Genomic-Tools Illumina Food-Traceability
updated 6 weeks ago by 43k • written 6 weeks ago by ★ 2.5k
0
votes
0
replies
172
views
News: Online course: Eukaryotic Metabarcoding
Metabarcoding Biodiversity R eDNA
6 weeks ago by carlopecoraro2 ★ 2.5k
3
votes
2
replies
786
views
News: Announcement: Research Topic "Mechanistic, Machine Learning and Hybrid Models of the 'Other' Endocrine Regulatory Systems in Health and Disease", Vol…
mathematical-modelling endocrinology ML systems-biology machine-learning
7 weeks ago by Johannes W. Dietrich • 0
0
votes
0
replies
232
views
News: Online course: Reproducibility in Bioinformatics
Singularity Version-Control Docker Containers
updated 7 weeks ago by 43k • written 7 weeks ago by ★ 2.5k
0
votes
0
replies
196
views
News: Online course: Analysis of Prokaryotic Pangenomes (Last call)
Prokaryotic Bacterial-Genomics Pangenomics
updated 7 weeks ago by 43k • written 7 weeks ago by ★ 2.5k
0
votes
0
replies
201
views
News: Online course: Introduction to GWAS
GWAS Imputation StatisticalPower
8 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
188
views
News: Online course: Adaptation Genomics
StructuralVariants Selection AdaptationGenomics PopulationStructure
8 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
181
views
News: Online course: Analysis of Prokaryotic Pangenomes
BacterialGenomics Pangenomics
8 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
260
views
News: Online course on Genome Assembly and Annotation (1 seat left)
Galaxy GenomeAssembly GenomeAnnotation
9 weeks ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
204
views
News: NCBI's ClinVar now accepting somatic variation data
variation NCBI somatic-variants ClinVar
9 weeks ago by PeterC_NCBI ▴ 410
1
vote
1
reply
300
views
News: EMBL Course Hands-on course for sample preparation and data analysis in proteomics
EMBLProteomics
updated 9 weeks ago by • 0 • written 3 months ago by ▴ 10
1
vote
0
replies
231
views
News: Learn how to create robust bioinformatics pipelines for reproducible and comparable NGS analyses
nextflow pipeline workshop
9 weeks ago by David Langenberger 11k
709 results • Page 1 of 15
Recent Votes
Answer: Q: GenomeScope input and how to interpret the results
Answer: How to find tandem duplications pattern in a DNA sequence
A: How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Seque
C: Snakemake vs. Nextflow: strengths and weaknesses
Answer: workflow management system : WDL, CWL, Ruffus, SnakeMake, etc
Sequence alignment on split read event such as inversion, duplication and complex nested events.
ICGEB - SLIBTEC NGS Workshop: Won Best Oral Presentation Award
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Popular Question to manaswwm ▴ 510
Popular Question to Raghad • 0
Scholar to Pierre Lindenbaum 161k
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Popular Question to scideas ▴ 30
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Recent Replies
Comment: GO analysis: p-value range by Matthias Zepper 4.6k
It is just a warning that you add a new scale to a ggplot2 plot, that already has an existing one, which will get replaced. Nothing to worr…
Comment: GO analysis: p-value range by marco.barr ▴ 130
If you write me the code you used I can help you more
Comment: GO analysis: p-value range by sooni ▴ 20
When I run the code, the following message appears: Scale for y is already present. Adding another scale for y, which will replace…
Comment: Why most genes have high padj values by mnx0723 • 0
In the case of other samples, the total number of genes is at least 3,000 more than that one, but it seems to be a relatively small number.…
Comment: How to hide label in layout file of MCscan (python version) by jinyi • 0
Command line is as follows: python -m jcvi.graphics.synteny Cs.Cm.i1.blocks Cs_Cm.bed layout2.txt
Comment: Add stats to the plot by marco.barr ▴ 130
Thank you, it seems to be clearer. Your Condition already has two factorial levels. You can replace these names in groups 1 and 2. da…
Comment: Error in using BioSampleParser tool: subscript out of bounds by marco.barr ▴ 130
Hi, I also had the same problem. If you check its github page there have been no releases for many years and these errors cannot be fixed. …
Comment: Add stats to the plot by Ghada • 0
Thanks, thats really helpful ![enter image description here][1] ![enter image description here][2] [1]: /media/images/0470f3dc-5945-…
Comment: PCA Visualization error in R by marco.barr ▴ 130
SNPRelate is an R package that is able to read from VCF files directly and perform PCA and IBD/IBS. See the documentation for details in Bi…
Comment: Why most genes have high padj values by ATpoint 82k
788 differential genes is a lot. What is the problem?
Comment: Why most genes have high padj values by mnx0723 • 0
Sorry, I made edits.
Comment: Why most genes have high padj values by Pierre Lindenbaum 161k
Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the cod…
Comment: GO analysis: p-value range by marco.barr ▴ 130
Try adding: `scale_y_continuous(breaks=seq(0, max_count, by=0.05))`
Comment: Functional enrichment analysis for unique gene IDs by ATpoint 82k
If these genes do not have a symbol then it is utterly unlikely that anyone has looked at their function. I would get their Ensembl IDs and…
Comment: Add stats to the plot by marco.barr ▴ 130
The error is likely due to the fact that the structure of your data in data4.ts and data2.ts may not contain the Condition values. The grou…
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