4 hours ago by
Hasan_Daaboul
•
0
0
votes
0
replies
35
views
0
votes
0
replies
39
views
1
vote
3
replies
132
views
0
votes
0
replies
69
views
14 hours ago by
Rodolfo Adrián
•
0
1
vote
1
reply
288
views
0
votes
0
replies
90
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
Mohamed Samir
▴
20
0
votes
0
replies
96
views
1 day ago by
Moinuddin
•
0
0
votes
1
reply
138
views
0
votes
0
replies
106
views
0
votes
0
replies
113
views
0
votes
0
replies
110
views
2 days ago by
kilcdincer
▴
10
0
votes
0
replies
133
views
2 days ago by
qudrat.nii
▴
10
1
vote
5
replies
342
views
0
votes
6
replies
328
views
0
votes
0
replies
116
views
updated 2 days ago by
GenoMax
142k
•
written 2 days ago by
yura.grabovska
▴
90
1
vote
1
reply
175
views
0
votes
2
replies
200
views
0
votes
2
replies
228
views
updated 2 days ago by
Pierre Lindenbaum
161k
•
written 2 days ago by
melissachua90
▴
70
0
votes
0
replies
116
views
0
votes
1
reply
360
views
updated 2 days ago by
GenoMax
142k
•
written 2 days ago by
huxiangyulove
•
0
0
votes
0
replies
135
views
0
votes
4
replies
322
views
2 days ago by
kilcdincer
▴
10
0
votes
0
replies
145
views
3 days ago by
sainavyav22
•
0
2
votes
2
replies
261
views
updated 3 days ago by
Ram
43k
•
written 3 days ago by
txema.heredia
▴
130
0
votes
0
replies
147
views
0
votes
1
reply
202
views
0
votes
0
replies
145
views
1
vote
1
reply
199
views
updated 2 days ago by
Nyksubuz
▴
20
•
written 3 days ago by
mirwa.zidi93
•
0
0
votes
0
replies
140
views
3 days ago by
ebertomeup
•
0
0
votes
3
replies
280
views
updated 2 days ago by
Pierre Lindenbaum
161k
•
written 3 days ago by
saifulislam99121
•
0
0
votes
0
replies
147
views
0
votes
1
reply
172
views
0
votes
4
replies
283
views
1 day ago by
mavy
▴
10
0
votes
1
reply
175
views
0
votes
1
reply
157
views
0
votes
0
replies
114
views
updated 4 days ago by
GenoMax
142k
•
written 4 days ago by
Rodolfo Adrián
•
0
1
vote
16
replies
745
views
updated 1 day ago by
GenoMax
142k
•
written 4 days ago by
hophuquy0944
•
0
0
votes
1
reply
140
views
4 days ago by
asalimih
▴
60
0
votes
0
replies
110
views
0
votes
1
reply
152
views
updated 3 days ago by
Papyrus
★
2.9k
•
written 4 days ago by
yura.grabovska
▴
90
0
votes
1
reply
153
views
0
votes
3
replies
170
views
0
votes
0
replies
98
views
4 days ago by
Shaimaa Gamal
▴
10
0
votes
5
replies
288
views
0
votes
1
reply
174
views
0
votes
0
replies
100
views
0
votes
0
replies
97
views
4 days ago by
brunofelicianodeomena
•
0
0
votes
1
reply
150
views
1
vote
2
replies
232
views
0
votes
2
replies
194
views
Recent Votes
Recent Locations •
All
Pakistan, 7 minutes ago
Brazil, 7 minutes ago
United States, 7 minutes ago
Italy, 11 minutes ago
Canada, 13 minutes ago
Finland, 15 minutes ago
UK, 16 minutes ago
Recent Awards •
All
Scholar to
Pierre Lindenbaum
161k
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
scideas
▴
30
Popular Question to
Muhammad
•
0
Popular Question to
synat.keam
▴
100
Recent Replies
Answer: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
Bibi
•
0
@atpoint thanks you for your timely response. Can someone else shed light if we can compare the trend of DEGs using the scRNA and Bulk RNA…
Comment: Add stats to the plot
by
GenoMax
142k
Please use `101010` to format `code` so it is represented in monospace font. I have done this for you now.
Answer: is there a tool to recover corrupted fastq files
by
Tommaso
•
0
You may also want to give a try to **FastqWiper** (https://github.com/mazzalab/fastqwiper)
Comment: Add stats to the plot
by
Ghada
•
0
Thanks. That helpful.
I am getting this error
data4_test <- data4.ts%>% ungroup() %>% t.test(data =.,value ~ Condition)%>%
+ …
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
ATpoint
82k
I cannot comment here. You are asking why results between two experiments are different. I do not know without seeing the data.
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
Bibi
•
0
Thank you so much for this insight. I just want to clarify another point here. I have used scRNA seq data from mice mammary epithelial cell…
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
Pierre Lindenbaum
161k
> Cannot read non-existent file: file:///local/home/User/VCF_Filtering/biostar.code
your file doesn't exist, is at the wrong place etc.
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
ajbarrett98
•
0
Hi Pierre,
I am attempting to run this code and am running into this error:
(jvar) $ jvarkit vcffilterjdk -f biostar.code Dart_VCF2_Or…
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
ATpoint
82k
I cannot give a precise answer, as ML is not my field, but generally, why don't you apply the method to pseudobulks of the exact single-cel…
Answer: geom_bar issue in ggplot2 with xlim()
by
ATpoint
82k
https://stackoverflow.com/questions/10365167/geom-bar-bars-not-displaying-when-specifying-ylim
Comment: What marks a De-Novo Genome assembly as FAILED?
by
Umer
▴
50
Yes. We are sequencing 45 different samples with illumina.
12 of these are also going to be sequenced with Nanopore (for hybrid assembly). …
Comment: HGVS Nomenclature of Multiple Indels found in Cis
by
LauferVA
4.2k
how has this code progressed? is it publically available? would you want to work together?
Comment: Design for complex RNA-Seq experiment using Deseq2
by
Ezequiel
•
0
I completely agree with most points. The PCA shows that the biggest driver of difference is the patients themselves, with PRE and POST time…
Comment: Add stats to the plot
by
marco.barr
▴
130
Hi, you can add statistical annotations using `ggpubr` function `stat_pvalue_manual `. You need to make sure you calculate the p-values fir…
Answer: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
ATpoint
82k
Use everything before the whitespace in list.txt, for example `A00869:294:HCW57DSXY:2:1101:3929:1000` and not `A00869:294:HCW57DSXY:2:1101:…
Traffic: 1135 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6