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Comment:
Comment: Why most genes have high padj values
49 minutes ago by
ATpoint
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49
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Comment:
Comment: Functional enrichment analysis for unique gene IDs
2 hours ago by
ATpoint
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272
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Comment:
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
12 hours ago by
ATpoint
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272
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Comment:
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
15 hours ago by
ATpoint
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151
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Comment:
Comment: Broad and Narrow peaks
1 day ago by
ATpoint
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213
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Comment:
Comment: How can I calculate the OS of each patient?
3 days ago by
ATpoint
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317
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Comment:
Comment: Can I perform a correlation test with 3 biological replicates per condition?
3 days ago by
ATpoint
82k
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317
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Comment:
Comment: Can I perform a correlation test with 3 biological replicates per condition?
3 days ago by
ATpoint
82k
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731
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
3 days ago by
ATpoint
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336
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Comment:
Comment: Would you bother re-mapping RNA-seq data from an old GRCh38 build to a newer ver
3 days ago by
ATpoint
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731
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
3 days ago by
ATpoint
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353
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Comment:
Comment: Details on salmon index
3 days ago by
ATpoint
82k
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234
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Comment:
Comment: Getting differential ChIP-seq peaks between conditions after calling consensus p
3 days ago by
ATpoint
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731
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
4 days ago by
ATpoint
82k
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270
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Comment:
Comment: RNAseq RNA content
5 days ago by
ATpoint
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2
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468
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Comment:
Comment: Overlapping Ranges within Granges object
5 days ago by
ATpoint
82k
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151
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Comment:
Comment: sci-RNA-seq
5 days ago by
ATpoint
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411
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Comment:
Comment: BWA alignment
6 days ago by
ATpoint
82k
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411
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Comment:
Comment: BWA alignment
6 days ago by
ATpoint
82k
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204
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Comment:
Comment: Publish a Letter in higher impact vs Research article in lower impact
6 days ago by
ATpoint
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370
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Comment:
Comment: How to remove multiple batch effects from RNA-seq data before limma differential
7 days ago by
ATpoint
82k
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604
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Comment:
Comment: Tissue-specific DEG analysis with DEseq2
7 days ago by
ATpoint
82k
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221
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Comment:
Comment: When should I use R-MarkDown over R-Script ?
10 days ago by
ATpoint
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1
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238
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Comment:
Comment: LncRNA Nomenclature
10 days ago by
ATpoint
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1
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435
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Comment:
Comment: Importing a fastq file
11 days ago by
ATpoint
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520
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Comment:
Comment: RNA seq analysis
11 days ago by
ATpoint
82k
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236
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Comment:
Comment: Exploring Diet Effects in Single-Cell RNA Sequencing
11 days ago by
ATpoint
82k
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1
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360
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Comment:
Comment: A question about reference genome for creating the consensus sequence
12 days ago by
ATpoint
82k
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212
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Comment:
Comment: Repeated testing/data mining in RNA Seq
12 days ago by
ATpoint
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251
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Comment:
Comment: Differentail gene expression results
12 days ago by
ATpoint
82k
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190
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Comment:
Comment: student
12 days ago by
ATpoint
82k
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272
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Comment:
Comment: error in R code
13 days ago by
ATpoint
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1
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287
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Comment:
Comment: creating batch colum for batch correction
15 days ago by
ATpoint
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1
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498
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Comment:
Comment: Differential Expression Analysis using DESeq2 in R
16 days ago by
ATpoint
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353
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Comment:
Comment: Generating mpileup file using samtools
16 days ago by
ATpoint
82k
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386
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Comment:
Comment: What analysis suitable to identify similarly expressed genes between two samples
16 days ago by
ATpoint
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330
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Comment:
Comment: Does comparing two different groups to a common third group introduce bias in th
17 days ago by
ATpoint
82k
2
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363
views
Comment:
Comment: Problem with data downloaded from Short Reads Archive (SRA)
17 days ago by
ATpoint
82k
0
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1
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363
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Comment:
Comment: Problem with data downloaded from Short Reads Archive (SRA)
17 days ago by
ATpoint
82k
1
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301
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Comment:
Comment: Odd alignment question/finding
18 days ago by
ATpoint
82k
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365
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Comment:
Comment: DESeq2 processing problems
18 days ago by
ATpoint
82k
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1
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205
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Comment:
Comment: Longitudinal analysis of subpopulations: which approach is better?
20 days ago by
ATpoint
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385
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Comment:
Comment: How to assign cell types after integration in scRNA
21 days ago by
ATpoint
82k
1
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1
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385
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Comment:
Comment: How to assign cell types after integration in scRNA
22 days ago by
ATpoint
82k
2
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1
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2.3k
views
Comment:
Comment: NGS forensics: how to know if data is fabricated
22 days ago by
ATpoint
82k
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456
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Comment:
Comment: PCA plot
23 days ago by
ATpoint
82k
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0
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3.8k
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Comment:
Comment: Treatment VS Control in Single Cell RNAseq analysis
24 days ago by
ATpoint
82k
1
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0
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271
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Comment:
Comment: Normalize scRNAseq data to housekeeping genes to compare several datasets
24 days ago by
ATpoint
82k
0
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1
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428
views
Comment:
Comment: Highest variable features in single cell data
25 days ago by
ATpoint
82k
2
votes
0
replies
620
views
Comment:
Comment: To get p-values for the TPM
25 days ago by
ATpoint
82k
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