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725
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Answer:
Answer: Differential analysis of enrichment results
3 months ago by
BioinfGuru
★ 2.1k
1
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1
reply
725
views
Comment:
Comment: Differential analysis of enrichment results
3 months ago by
BioinfGuru
★ 2.1k
2
votes
2
replies
912
views
Answer:
Answer: Conversion of Gene Name to Ensembl ID
3 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
1.1k
views
Comment:
Comment: Running fastqc in parallel
3 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
502
views
Comment:
Comment: Pathway analysis for DGEList
3 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
502
views
Answer:
Answer: Pathway analysis for DGEList
3 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
185
views
Should I run SVA or not?
Clustering
SVA
Batch
3 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.1k
views
Comment:
Comment: Running fastqc in parallel
3 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
311
views
Answer:
Answer: Associations with small-ish patient clinical data with bulk RNA-seq expression
3 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
509
views
Comment:
Comment: Comparing two RNAseq runs for the same samples
3 months ago by
BioinfGuru
★ 2.1k
3
votes
2
replies
1.1k
views
Answer:
Answer: Running fastqc in parallel
3 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
308
views
Comment:
Comment: What does evidence of batch effect in bulk rnaseq look like?
3 months ago by
BioinfGuru
★ 2.1k
2
votes
2
replies
308
views
What does evidence of batch effect in bulk rnaseq look like?
batches
sva
surrogates
3 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
930
views
Comment:
Comment: Tissue-specific DEG analysis with DEseq2
5 months ago by
BioinfGuru
★ 2.1k
1
vote
0
replies
988
views
Comment:
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
6 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
988
views
Comment:
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
4.8k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
6 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
4.8k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
6 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
4.8k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
6 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
4.8k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
4.8k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
6 months ago by
BioinfGuru
★ 2.1k
0
votes
2
replies
4.8k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.0k
views
Comment:
Comment: RNA seq differential expression analysis
6 months ago by
BioinfGuru
★ 2.1k
7
votes
13
replies
4.8k
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
R
Ubuntu
Linux
Bioconductor
Rstudio
updated 6 months ago by
ATpoint
85k • written 6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.1k
views
Comment:
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions
6 months ago by
BioinfGuru
★ 2.1k
5
votes
4
replies
1.1k
views
DEG analysis of RNA-seq data across multiple tissues and two conditions
RNA-seq
EdgeR
DEGs
DESeq2
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.1k
views
Comment:
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
6 months ago by
BioinfGuru
★ 2.1k
1
vote
0
replies
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
436
views
Answer:
Answer: gene body coverage with RSeqQC
6 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
528
views
Comment:
Comment: Bioinformatics_where do i start
6 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
6 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
6 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
618
views
Comment:
Comment: what is the normal range of htseq-count output for homo sapiens RNA-Seq
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
949
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
6 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
949
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
537
views
Comment:
Comment: Removing batch effect using combat-seq
7 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
537
views
Comment:
Comment: Removing batch effect using combat-seq
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
949
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
949
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
457
views
Answer:
Answer: Tissue specific mRNA expression dataset in human and mouse
7 months ago by
BioinfGuru
★ 2.1k
2
votes
1
reply
927
views
Answer:
Answer: Mapping ortholog human and mouse transcript
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
592
views
Comment:
Comment: How do I get the gene annotations as a text file from a genebank file?
7 months ago by
BioinfGuru
★ 2.1k
0
votes
2
replies
1.6k
views
Comment:
Comment: What is the sequence origin in human plasma?
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
375
views
Comment:
Comment: PCA script correction
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
867
views
Comment:
Comment: Searching for gene in multiple genomes
7 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.6k
views
Comment:
Comment: What is the sequence origin in human plasma?
7 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
867
views
Answer:
Answer: Searching for gene in multiple genomes
7 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.3k
views
Answer:
Answer: cutadapt not trimming all adapters in PE Illumina sequencing
7 months ago by
BioinfGuru
★ 2.1k
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